ggKbase home page

sw_4_scaffold_2384

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2384_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

153..1268
DNA (1116bp) protein (372aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC88_9EURY
sw_4_scaffold_2384_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1347..2003
DNA (657bp) protein (219aa)
Ribonuclease BN n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGZ1_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA43690.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ribonuclease BN
sw_4_scaffold_2384_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2000..2182
DNA (183bp) protein (61aa)
Ribonuclease BN n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB43_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA55187.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ribonuclease BN
sw_4_scaffold_2384_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2253..3113
DNA (861bp) protein (287aa)
Ribonuclease BN n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD78_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA43691.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ribonuclease BN
sw_4_scaffold_2384_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3110..3556
DNA (447bp) protein (149aa)
Ribonuclease BN n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NER3_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA55185.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
hypothetical protein
sw_4_scaffold_2384_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3581..4867)
DNA (1287bp) protein (429aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL7_9EURY
sw_4_scaffold_2384_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5103..5396
DNA (294bp) protein (98aa)
AsnC family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG76_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:EMA43694.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
trh2; AsnC family transcriptional regulator
sw_4_scaffold_2384_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5393..5737)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55182.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_2384_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5949..7412)
DNA (1464bp) protein (488aa)
Thermosome subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBE8_9EURY
Thermosome subunit alpha {ECO:0000313|EMBL:EMA55181.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
thermosome
sw_4_scaffold_2384_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7409..7507)
DNA (99bp) protein (33aa)
Thermosome n=1 Tax=Halobacterium sp. DL1 RepID=G4IBN5_9EURY
thermosome
Thermosome subunit {ECO:0000313|EMBL:AHG02597.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_4_scaffold_2384_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7637..8605)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55180.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_2384_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9009..9497)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIN5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44315.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_2384_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9494..10177)
DNA (684bp) protein (228aa)
Haloacid dehalogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC80_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:EMA55178.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
haloacid dehalogenase, type II
sw_4_scaffold_2384_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10333..10740
DNA (408bp) protein (136aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD90_9EURY
Suspect SCG annotation. See neighboring gene [sw_4_scaffold_2384_15].
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227455 species="Arc
tif2g; translation initiation factor aIF-2 gamma subunit
sw_4_scaffold_2384_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10706..11569
DNA (864bp) protein (288aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB32_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227456 species="Arc
eif2G; translation initiation factor IF-2 subunit gamma
sw_4_scaffold_2384_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11566..11778
DNA (213bp) protein (71aa)
Putative RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBE3_9EURY
Putative RNA-binding protein {ECO:0000313|EMBL:EMA55176.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
SSU processome protein utp24
Displaying 16 items

View Taxonomy