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sw_4_scaffold_2874

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2874_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..547
DNA (546bp) protein (182aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
hypothetical protein
sw_4_scaffold_2874_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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576..1697
DNA (1122bp) protein (374aa)
Cell division protein FtsZ n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N928_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
ftsZ3; cell division protein FtsZ
sw_4_scaffold_2874_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2413..3354)
DNA (942bp) protein (314aa)
Periplasmic copper-binding protein n=2 Tax=Halococcus hamelinensis RepID=M0M4F3_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EMA39260.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamel
sw_4_scaffold_2874_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3557..3730
DNA (174bp) protein (58aa)
Protein translocase subunit SecE n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5G3_9EURY
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1227456 species="Archaea; Euryarchaeo
secE; preprotein translocase subunit SecE
sw_4_scaffold_2874_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3732..4070
DNA (339bp) protein (113aa)
Transcription elongation factor Spt5 n=2 Tax=Halococcus RepID=M0MJL6_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
NusG antitermination factor
sw_4_scaffold_2874_6
Danio rerio, Danio, Cypriniformes, Neopterygii, Chordata, Metazoa

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comp(4406..5032)
DNA (627bp) protein (209aa)
GK17577 n=1 Tax=Drosophila willistoni RepID=B4NPA0_DROWI
GK17577 gene product from transcript GK17577-RA
Uncharacterized protein {ECO:0000313|Ensembl:ENSDARP00000110773}; TaxID=7955 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariop
sw_4_scaffold_2874_7
unknown

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5218..5805
DNA (588bp) protein (196aa)

This feature has no annotations

sw_4_scaffold_2874_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5890..6726
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHV5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44923.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_2874_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6774..7949)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5G8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53162.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_2874_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8048..8536)
DNA (489bp) protein (163aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGS8_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA44921.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
sw_4_scaffold_2874_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8611..8895)
DNA (285bp) protein (95aa)
Damage inducible protein CinA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7R6_9EURY
Damage inducible protein CinA {ECO:0000313|EMBL:EMA53164.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
damage inducible protein CinA
sw_4_scaffold_2874_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9325..10425
DNA (1101bp) protein (367aa)
aspartate transaminase (EC:2.6.1.1)
Class I and II aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N938_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA53165.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
sw_4_scaffold_2874_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10686..11510)
DNA (825bp) protein (275aa)
Oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5M1_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA53166.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
oxidoreductase
sw_4_scaffold_2874_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11616..12419)
DNA (804bp) protein (268aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
nfi; endonuclease V (EC:3.1.21.7)
Endonuclease V n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5H3_9EURY
Displaying 14 items

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