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sw_4_scaffold_302

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_302_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..166)
DNA (165bp) protein (55aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKN7_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA45304.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
amino acid ABC transporter ATP-binding protein
sw_4_scaffold_302_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(159..2147)
DNA (1989bp) protein (663aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZA4_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA50936.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livH-9; branched-chain amino acid ABC transporter permease
sw_4_scaffold_302_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2155..3663)
DNA (1509bp) protein (503aa)
Amino acid-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYY1_9EURY
Amino acid-binding protein {ECO:0000313|EMBL:EMA50937.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
amino acid-binding protein
sw_4_scaffold_302_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3860..4243)
DNA (384bp) protein (128aa)
Thioesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHV0_9EURY
Thioesterase {ECO:0000313|EMBL:EMA45307.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
thioesterase
sw_4_scaffold_302_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4798..6057)
DNA (1260bp) protein (420aa)
Initiation factor 2B related protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIX6_9EURY
Initiation factor 2B related protein {ECO:0000313|EMBL:EMA45308.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
initiation factor 2B related protein
sw_4_scaffold_302_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6129..6626
DNA (498bp) protein (166aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
Phosphodiesterase, MJ0936 family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKP1_9EURY
phosphodiesterase, MJ0936 family protein
sw_4_scaffold_302_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6728..6862
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0E1_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB62838.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_4_scaffold_302_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7122..7775
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0E1_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB62838.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_4_scaffold_302_9
unknown

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comp(7811..8446)
DNA (636bp) protein (212aa)

This feature has no annotations

sw_4_scaffold_302_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8863..9690
DNA (828bp) protein (276aa)
Transcriptional regulator n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KTE5_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA24208.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JC
hypothetical protein
sw_4_scaffold_302_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9687..10088
DNA (402bp) protein (134aa)
Cupin n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LN69_HALJP
Cupin {ECO:0000313|EMBL:EMA33480.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
cupin 2 barrel domain-containing protein
sw_4_scaffold_302_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10288..11247
DNA (960bp) protein (320aa)
apl; AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein (EC:4.2.99.18)
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAK6_9EURY
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein {ECO:0000313|EMBL:EMA53690.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
sw_4_scaffold_302_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11416..13197)
DNA (1782bp) protein (594aa)
ABC transporter integral membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7Z6_9EURY
ABC transporter integral membrane protein {ECO:0000313|EMBL:ELZ30279.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimpl
ABC transporter integral membrane protein
sw_4_scaffold_302_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13300..14157)
DNA (858bp) protein (286aa)
RbsA2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5Z1_9EURY
RbsA2 {ECO:0000313|EMBL:ELZ30278.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
RbsA2
sw_4_scaffold_302_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14161..15498)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6F2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30277.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_302_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15657..16505
DNA (849bp) protein (283aa)
Putative sugar phosphate isomerase/epimerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCN9_HALJB
putative sugar phosphate isomerase/epimerase
Putative sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ADJ17146.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Ha
sw_4_scaffold_302_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16793..17557
DNA (765bp) protein (255aa)
ArcR family transcription regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ37_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ28480.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
arcR14; ArcR family transcription regulator
sw_4_scaffold_302_18
unknown

Not on your lists

comp(18088..19173)
DNA (1086bp) protein (362aa)

This feature has no annotations

sw_4_scaffold_302_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19179..20021
DNA (843bp) protein (281aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin r
mer1; methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYY6_9EURY
sw_4_scaffold_302_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19975..20196)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHV4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45312.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_302_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20272..20427
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1G0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50944.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_302_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20500..20847
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45314.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_4_scaffold_302_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20871..21293)
DNA (423bp) protein (141aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2M1_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA50945.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
MaoC domain-containing protein dehydratase
sw_4_scaffold_302_24
unknown

Not on your lists

comp(21679..21909)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_4_scaffold_302_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21878..22093)
DNA (216bp) protein (72aa)
Putative Hsp20 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKH6_9EURY
Putative Hsp20 {ECO:0000313|EMBL:EMA44940.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.
Displaying 25 items

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