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sw_4_scaffold_433

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_433_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..339
DNA (339bp) protein (113aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
ilvE2; branched-chain amino acid aminotransferase
sw_4_scaffold_433_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

369..785
DNA (417bp) protein (139aa)
Oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N840_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA53743.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
2Fe-2S ferredoxin
sw_4_scaffold_433_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(830..1126)
DNA (297bp) protein (99aa)
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGU4_9EURY
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:EMA44936.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
hypothetical protein
sw_4_scaffold_433_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1199..1924)
DNA (726bp) protein (242aa)
Alanyl-tRNA synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N031_9EURY
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EMA50444.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
threonyl/alanyl tRNA synthetase, SAD
sw_4_scaffold_433_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1990..2463)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50443.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_433_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2502..2675)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49606.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_4_scaffold_433_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2817..3410
DNA (594bp) protein (198aa)
Ferritin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW4_9EURY
Ferritin {ECO:0000313|EMBL:EMA45384.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
Ferritin Dps family protein
sw_4_scaffold_433_8
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3571..5754)
DNA (2184bp) protein (728aa)
Transporter n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IMT3_9EURY
Transporter {ECO:0000313|EMBL:ELZ98111.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
cat4; transport protein (probable substrate cationic amino acids)
sw_4_scaffold_433_9
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5751..6173)
DNA (423bp) protein (141aa)
TrkA-N domain-containing protein n=3 Tax=Haloferax RepID=L5NXS3_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELZ92215.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus
trkA8; TrkA-N domain protein
sw_4_scaffold_433_10
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6370..6915
DNA (546bp) protein (182aa)
Asn family transcriptional regulator n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IN17_9EURY
Asn family transcriptional regulator {ECO:0000313|EMBL:ELZ98110.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum AT
trh3; Asn family transcriptional regulator
sw_4_scaffold_433_11
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7060..8097)
DNA (1038bp) protein (346aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDU5_HALXS
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:AEH39199.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduen
sw_4_scaffold_433_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8142..8303)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50441.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_433_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8427..9158
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N185_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50440.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_433_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9218..9565)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N027_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50439.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_433_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9562..10719)
DNA (1158bp) protein (386aa)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLQ4_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA45380.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
acetyl-CoA acetyltransferase
sw_4_scaffold_433_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10765..12366)
DNA (1602bp) protein (534aa)
Acetyl-CoA carboxylase alpha subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW0_9EURY
Acetyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:EMA45379.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
carboxyl transferase
sw_4_scaffold_433_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12368..13111)
DNA (744bp) protein (248aa)
dehydrogenase/reductase 2 (EC:1.1.1.-)
3-oxoacyl-ACP reductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUA6_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA36753.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_4_scaffold_433_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13239..13736)
DNA (498bp) protein (166aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCR9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA54465.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
sw_4_scaffold_433_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13958..15733
DNA (1776bp) protein (592aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ81_9EURY
ligB; DNA ligase (ATP)
sw_4_scaffold_433_20
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15783..16781
DNA (999bp) protein (333aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
sw_4_scaffold_433_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16840..17103
DNA (264bp) protein (88aa)
SOUL heme-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW3_9EURY
SOUL heme-binding protein {ECO:0000313|EMBL:EMA50436.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
sw_4_scaffold_433_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17100..17543
DNA (444bp) protein (148aa)
SOUL heme-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW3_9EURY
SOUL heme-binding protein {ECO:0000313|EMBL:EMA50436.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
SOUL heme-binding protein
sw_4_scaffold_433_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17727..19418
DNA (1692bp) protein (564aa)
Putative cell surface protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6T6_9EURY
Putative cell surface protein {ECO:0000313|EMBL:EMA41108.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
sw_4_scaffold_433_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19415..20092
DNA (678bp) protein (226aa)
Putative cell surface protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6T6_9EURY
Putative cell surface protein {ECO:0000313|EMBL:EMA41108.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
glycoside hydrolase family 43
sw_4_scaffold_433_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20111..21622
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N022_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50434.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_433_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21910..23076
DNA (1167bp) protein (389aa)
Alpha-1,4-glucan-protein synthase, UDP-forming n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP2_9EURY
Alpha-1,4-glucan-protein synthase, UDP-forming {ECO:0000313|EMBL:EMA50433.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
Reversibly glycosylated polypeptide
sw_4_scaffold_433_27
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23134..24111
DNA (978bp) protein (326aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTM7_HALBP
iron ABC transporter substrate-binding protein
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:ADQ67079.1}; Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY29625.1}; TaxID=469382 species="Archaea; Euryar
Displaying 27 items

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