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sw_4_scaffold_469

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_469_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..855)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6E0E3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK41073.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_4_scaffold_469_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1160..1744
DNA (585bp) protein (195aa)
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBH5_9EURY
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EMA54918.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
DEAD/DEAH box helicase domain protein
sw_4_scaffold_469_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1751..2029)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43869.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_469_trna_1
unknown

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2113..2185
DNA (73bp)
transferRNA
sw_4_scaffold_469_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2224..2643
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MGX8_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA43954.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_469_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2679..3548
DNA (870bp) protein (290aa)
Metal-dependent hydrolase of the beta-lactamase superfamily I n=1 Tax=halophilic archaeon J07HB67 RepID=U1PUE9_9EURY
beta-lactamase superfamily metal-dependent hydrolase
Metal-dependent hydrolase of the beta-lactamase superfamily I {ECO:0000313|EMBL:ERH13779.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
sw_4_scaffold_469_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3621..7304
DNA (3684bp) protein (1228aa)
Replicative DNA helicase / cell division control protein 21 /MCM n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAL9_9EURY
Replicative DNA helicase / cell division control protein 21 /MCM {ECO:0000313|EMBL:EMA54921.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
XRE family transcriptional regulator
sw_4_scaffold_469_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7333..8184)
DNA (852bp) protein (284aa)
Transcription initiation factor IIB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDM8_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
tfb1; transcription initiation factor IIB
sw_4_scaffold_469_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8253..8678)
DNA (426bp) protein (142aa)
Histidine triad protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP2_9EURY
Histidine triad protein {ECO:0000313|EMBL:EMA43866.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hit2; histidine triad protein
sw_4_scaffold_469_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8733..9365)
DNA (633bp) protein (211aa)
Uracil-DNA glycosylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCV8_9EURY
Uracil-DNA glycosylase {ECO:0000313|EMBL:EMA54924.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
uracil-DNA glycosylase-like protein
sw_4_scaffold_469_10
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9481..10389)
DNA (909bp) protein (303aa)
id=24653901 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24653901 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
sw_4_scaffold_469_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10640..12637
DNA (1998bp) protein (666aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1227456 species="Archaea; E
Isoleucine--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE17_9EURY
isoleucyl-tRNA synthetase
sw_4_scaffold_469_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12644..13495)
DNA (852bp) protein (284aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAM5_9EURY
ribose-phosphate pyrophosphokinase
sw_4_scaffold_469_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13492..14271)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43856.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_469_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14807..15580)
DNA (774bp) protein (258aa)
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPW2_9EURY
Arginase {ECO:0000313|EMBL:EMA46774.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
sw_4_scaffold_469_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15645..16562)
DNA (918bp) protein (306aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN14_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA46773.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
nucleoside-diphosphate-sugar epimerase
sw_4_scaffold_469_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16689..17213
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM48_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA46772.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
hypothetical protein
sw_4_scaffold_469_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17244..17843)
DNA (600bp) protein (200aa)
Transcription regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM69_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA46771.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
transcriptional regulator
sw_4_scaffold_469_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17939..19060)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46770.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
membrane protease subunit, stomatin/prohibitin
sw_4_scaffold_469_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19072..19686)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46769.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_469_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19822..20061)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55659.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_469_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(20066..22066)
DNA (2001bp) protein (667aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1227455 species="Archaea;
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM63_9EURY
sw_4_scaffold_469_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22413..23012)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46765.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_469_23
unknown

Not on your lists

comp(23038..23169)
DNA (132bp) protein (44aa)

This feature has no annotations

sw_4_scaffold_469_24
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23280..23924)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H7V5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ80525.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_4_scaffold_469_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24169..24891)
DNA (723bp) protein (241aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCU3_9EURY
phosphoenolpyruvate synthase
Displaying 26 items

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