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sw_4_scaffold_487

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_487_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(91..1131)
DNA (1041bp) protein (347aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1227456 species="Archaea
endA; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS7_9EURY
sw_4_scaffold_487_2
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1202..1885)
DNA (684bp) protein (228aa)
Uncharacterized protein (Fragment) n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CBX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20791.1}; Flags: Fragment;; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
sw_4_scaffold_487_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2003..2863)
DNA (861bp) protein (287aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU4_9EURY
DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:EMA43168.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
DNA topoisomerase type IA Zn finger domain protein
sw_4_scaffold_487_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3022..5352)
DNA (2331bp) protein (777aa)
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF6_9EURY
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EMA43155.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
DEAD/DEAH box helicase domain-containing protein
sw_4_scaffold_487_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5697..7106)
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCS9_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA43153.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
MATE efflux family protein
sw_4_scaffold_487_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7267..8217
DNA (951bp) protein (317aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW94_9EURY
lipoate synthase
sw_4_scaffold_487_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8532..10433
DNA (1902bp) protein (634aa)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBM7_9EURY
Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha {ECO:0000313|EMBL:EMA43151.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
sw_4_scaffold_487_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10435..12027
DNA (1593bp) protein (531aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ6_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA43149.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
sw_4_scaffold_487_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12083..13123)
DNA (1041bp) protein (347aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0J2_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA38129.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase of unknown substrate specificity
sw_4_scaffold_487_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13241..14665
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXE3_9EURY
dihydrolipoamide dehydrogenase
sw_4_scaffold_487_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14767..15123
DNA (357bp) protein (119aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
sw_4_scaffold_487_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15190..16488
DNA (1299bp) protein (433aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1227456 species="Archaea; Eu
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWN1_9EURY
sw_4_scaffold_487_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16547..17728
DNA (1182bp) protein (394aa)
Sulfatase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WX60_9EURY
Sulfatase {ECO:0000313|EMBL:ELY54035.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM 1225
arylsulfatase A family protein
Displaying 13 items

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