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sw_4_scaffold_558

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_558_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..292
DNA (291bp) protein (97aa)
N-acetyltransferase GCN5 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDJ8_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA55164.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
N-acetyltransferase GCN5
sw_4_scaffold_558_2
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(311..1216)
DNA (906bp) protein (302aa)
Putative metal ion permease n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J5K7_9EURY
Putative metal ion permease {ECO:0000313|EMBL:EMA03623.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC
putative metal ion permease
sw_4_scaffold_558_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1690..2160)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55162.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_558_4
unknown

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comp(2153..2251)
DNA (99bp) protein (33aa)

This feature has no annotations

sw_4_scaffold_558_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2407..2595
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43716.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_4_scaffold_558_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2646..3776)
DNA (1131bp) protein (377aa)
DNA primase large subunit PriL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD71_9EURY
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
DNA primase, large subunit
sw_4_scaffold_558_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3926..4561
DNA (636bp) protein (212aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDJ3_9EURY
sw_4_scaffold_558_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4658..5317)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42694.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_558_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5355..5633)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42693.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_558_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5754..7814)
DNA (2061bp) protein (687aa)
GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA72_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA42692.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
small GTP-binding protein
sw_4_scaffold_558_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8549..10345
DNA (1797bp) protein (599aa)
ORC1-type DNA replication protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAB6_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
orc1/cdc6 family replication initiation protein
sw_4_scaffold_558_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10429..11307)
DNA (879bp) protein (293aa)
Signal peptidase I-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME48_9EURY
Signal peptidase I-like protein {ECO:0000313|EMBL:EMA42690.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
signal peptidase I
sw_4_scaffold_558_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11425..13095
DNA (1671bp) protein (557aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1227456 species="Archaea; Eurya
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAW7_9EURY
sw_4_scaffold_558_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13661..15730
DNA (2070bp) protein (690aa)
UvrABC system protein B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAW0_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; excinuclease ABC subunit B
sw_4_scaffold_558_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15761..16390)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_558_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16477..16917)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42699.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_4_scaffold_558_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17066..18802)
DNA (1737bp) protein (579aa)
UvrABC system protein C n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME59_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1227455 species="A
Excinuclease ABC subunit C
sw_4_scaffold_558_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18885..19982)
DNA (1098bp) protein (366aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDD7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA55094.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
hypothetical protein
sw_4_scaffold_558_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20092..20760)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42702.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_4_scaffold_558_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21378..23534)
DNA (2157bp) protein (719aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1227456 species="Archaea
NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAV6_9EURY
sw_4_scaffold_558_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23680..23931)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N676_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52195.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_558_22
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23958..25754)
DNA (1797bp) protein (599aa)
Probable translation initiation factor IF-2 n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I922_HALRX
translation initiation factor aIF-2/yIF-2
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax r
sw_4_scaffold_558_23
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25828..27561)
DNA (1734bp) protein (578aa)
Brp-like protein-like protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQW2_HALVA
Brp-like protein-like protein {ECO:0000313|EMBL:EMA11381.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
blh; Brp-like protein-like
sw_4_scaffold_558_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27811..28608)
DNA (798bp) protein (266aa)
Cruxrhodopsin n=2 Tax=Haloarcula japonica RepID=Q9YGB7_HALJP
Cruxrhodopsin {ECO:0000313|EMBL:BAA81816.1}; Flags: Precursor;; TaxID=29282 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica.
rhodopsin
sw_4_scaffold_558_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28791..30500)
DNA (1710bp) protein (570aa)
Bacterio-opsin activator n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV78_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:EFW91596.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
bacterio-opsin activator
sw_4_scaffold_558_26
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30800..31177)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CN55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23309.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_4_scaffold_558_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31519..31761
DNA (243bp) protein (81aa)
PRC-barrel domain-containing protein n=2 Tax=Halococcus RepID=M0MEP5_9EURY
PRC-barrel domain-containing protein {ECO:0000313|EMBL:EMA52197.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
PRC-barrel domain-containing protein
sw_4_scaffold_558_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31761..32219
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43133.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
DNA-binding protein
sw_4_scaffold_558_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32242..33006)
DNA (765bp) protein (255aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N500_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA52199.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
hypothetical protein
sw_4_scaffold_558_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33089..34150)
DNA (1062bp) protein (354aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
phosphoglucose isomerase (PGI) (EC:5.3.1.9)
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK9_9EURY
Displaying items 1-30 of 36 in total

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