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sw_4_scaffold_714

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_714_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..101)
DNA (99bp) protein (33aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit K n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4E3_HALMO
sw_4_scaffold_714_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(101..292)
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP08_9EURY
sw_4_scaffold_714_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(329..724)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3X2_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
archaeal ribosomal protein S9P
sw_4_scaffold_714_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(718..1152)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q4_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rpl13p; 50S ribosomal protein L13P
sw_4_scaffold_714_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1149..1499)
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L18
sw_4_scaffold_714_trna_2
unknown

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comp(1515..1599)
DNA (85bp)
transferRNA
sw_4_scaffold_714_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1786..2532)
DNA (747bp) protein (249aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
sw_4_scaffold_714_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2536..2925)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7C4_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rps11p; 30S ribosomal protein S11P
sw_4_scaffold_714_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2922..3170)
DNA (249bp) protein (83aa)
30S ribosomal protein S4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP59_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps4; 30S ribosomal protein S4
sw_4_scaffold_714_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3271..3873)
DNA (603bp) protein (201aa)
30S ribosomal protein S13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q7_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
30S ribosomal protein S18e (S13p)
sw_4_scaffold_714_trna_1
unknown

Not on your lists

comp(3891..3975)
DNA (85bp)
transferRNA
sw_4_scaffold_714_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4159..5223
DNA (1065bp) protein (355aa)
ATP-binding protein Mrp 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V3_9EURY
ATP-binding protein Mrp 1 {ECO:0000313|EMBL:EMA52558.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
plasmid partitioning ATPase-like protein
sw_4_scaffold_714_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5129..5692)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50193.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_714_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5940..7370
DNA (1431bp) protein (477aa)
Aldehyde Dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N645_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA52584.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
NAD-dependent aldehyde dehydrogenase
sw_4_scaffold_714_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7378..10065
DNA (2688bp) protein (896aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E7_9EURY
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:EMA52585.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
sw_4_scaffold_714_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10150..11412)
DNA (1263bp) protein (421aa)
N-acylglucosamine 2-epimerase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M9S0_9EURY
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:EMA42083.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
N-acylglucosamine 2-epimerase
sw_4_scaffold_714_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11567..12601
DNA (1035bp) protein (345aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N659_9EURY
sw_4_scaffold_714_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12650..12952)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7G2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52600.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_714_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13564..14052
DNA (489bp) protein (163aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNW4_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMA47402.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
glyoxalase/bleomycin resistance protein/dioxygenase
sw_4_scaffold_714_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14049..14234
DNA (186bp) protein (62aa)
Flavin reductase like domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N664_9EURY
Flavin reductase like domain protein {ECO:0000313|EMBL:EMA52604.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
flavin reductase domain-containing FMN-binding protein
sw_4_scaffold_714_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14274..14705
DNA (432bp) protein (144aa)
Flavin reductase like domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP19_9EURY
Flavin reductase like domain protein {ECO:0000313|EMBL:EMA47401.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
conserved protein of DIM6/NTAB family
sw_4_scaffold_714_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15014..15358)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7G4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52605.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_714_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15424..15639)
DNA (216bp) protein (72aa)
Surface glycoprotein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRM9_9EURY
Surface glycoprotein {ECO:0000313|EMBL:EMA47399.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
surface glycoprotein precursor
sw_4_scaffold_714_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15994..17337
DNA (1344bp) protein (448aa)
Isochorismate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3V0_9EURY
Isochorismate synthase {ECO:0000313|EMBL:EMA52607.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
isochorismate synthase
sw_4_scaffold_714_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17494..19005
DNA (1512bp) protein (504aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC:4.2.99.20)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4Z4_9EURY
sw_4_scaffold_714_24
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19173..19850)
DNA (678bp) protein (226aa)
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NMP3_9EURY
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:ERG98690.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
binding-protein-dependent transport systems inner membrane component
sw_4_scaffold_714_25
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19852..20835)
DNA (984bp) protein (328aa)
ABC transporter n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XRM2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY63283.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
ABC transporter
sw_4_scaffold_714_26
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20832..21551)
DNA (720bp) protein (240aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNA7_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ELY63284.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.
binding-protein-dependent transport systems inner membrane component
sw_4_scaffold_714_27
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21556..22488)
DNA (933bp) protein (311aa)
Glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNF8_9EURY
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY63285.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="
glycine/betaine ABC transporter substrate-binding protein
sw_4_scaffold_714_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22717..23634
DNA (918bp) protein (306aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1227456 spec
Naphthoate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N668_9EURY
naphthoate synthase
Displaying items 1-30 of 32 in total

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