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sw_4_scaffold_726

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_726_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..407)
DNA (405bp) protein (135aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
N2,N2-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC88_9EURY
sw_4_scaffold_726_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(523..822)
DNA (300bp) protein (100aa)
Nucleotide pyrophosphohydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNU6_9EURY
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EMA46110.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
putative pyrophosphatase
sw_4_scaffold_726_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(920..2056)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34506.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_4_scaffold_726_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2330..3340)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43860.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_726_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3333..3530)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43861.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_726_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3685..4728)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEU7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43863.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_726_7

Not on your lists

comp(4725..4955)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKQ2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05153.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_726_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5067..5414
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBF4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55191.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
metal-binding protein
sw_4_scaffold_726_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5705..7045)
DNA (1341bp) protein (447aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminot
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEX2_9EURY
glutamate-1-semialdehyde aminotransferase
sw_4_scaffold_726_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7077..7625)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R7L7_HALS3
hem operon protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20431.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_4_scaffold_726_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7901..8314)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLZ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46712.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_726_12
unknown

Not on your lists

8566..9252
DNA (687bp) protein (229aa)

This feature has no annotations

sw_4_scaffold_726_13
Equid herpesvirus 1, Varicellovirus, Herpesvirales, Viruses

Not on your lists

9212..9793
DNA (582bp) protein (194aa)
Membrane glycoprotein {ECO:0000313|EMBL:AII81404.1}; TaxID=10326 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source="Equid herpes
sw_4_scaffold_726_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9715..10266)
DNA (552bp) protein (184aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=122
GMP synthase subunit A (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM20_9EURY
sw_4_scaffold_726_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10567..11853
DNA (1287bp) protein (429aa)
Glutamate dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT9_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
Glu/Leu/Phe/Val dehydrogenase
sw_4_scaffold_726_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11891..12328)
DNA (438bp) protein (146aa)
bphC3; biphenyl-2,3-diol 1,2-dioxygenase III (EC:1.13.11.39)
Biphenyl-2,3-diol 1,2-dioxygenase III n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCZ8_9EURY
Biphenyl-2,3-diol 1,2-dioxygenase III {ECO:0000313|EMBL:EMA55438.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
sw_4_scaffold_726_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12438..12995)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMV3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46708.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_726_18

Not on your lists

13106..13339
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZS04_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05515.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_4_scaffold_726_19
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13323..13709
DNA (387bp) protein (129aa)
PilT protein domain-containing protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZRI2_9EURY
PilT protein domain-containing protein {ECO:0000313|EMBL:ELY88167.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeir
PilT protein domain-containing protein
sw_4_scaffold_726_20
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13797..14009
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K3W3_9EURY
protein of unknown function DUF217
Uncharacterized protein {ECO:0000313|EMBL:AGB39716.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_4_scaffold_726_21
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14062..14397
DNA (336bp) protein (112aa)
Ribonuclease VapC n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PBE9_9EURY
Twitching motility protein PilT {ECO:0000313|EMBL:KKF39380.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;
putative nucleic acid-binding protein, contains PIN domain
sw_4_scaffold_726_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14490..15986
DNA (1497bp) protein (499aa)
leuA_2; (R)-citramalate synthase (EC:2.3.3.- 2.3.3.13)
(R)-citramalate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLZ2_9EURY
(R)-citramalate synthase {ECO:0000313|EMBL:EMA46707.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
Displaying 22 items

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