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sw_4_scaffold_733

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_733_1

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comp(1..351)
DNA (351bp) protein (117aa)
Putative methyltransferase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TFZ2_AMYOR
Marine sediment metagenome DNA, contig: S01H1_C00395 {ECO:0000313|EMBL:GAF76670.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative methyltransferase
sw_4_scaffold_733_2
unknown

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comp(461..790)
DNA (330bp) protein (110aa)

This feature has no annotations

sw_4_scaffold_733_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1100..1534
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N456_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52722.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_733_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1557..2486)
DNA (930bp) protein (310aa)
galE2; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4B2_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA52721.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
sw_4_scaffold_733_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2595..3290
DNA (696bp) protein (232aa)
DSBA oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIG0_9EURY
DSBA oxidoreductase {ECO:0000313|EMBL:EMA45471.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
DSBA oxidoreductase
sw_4_scaffold_733_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3298..3834
DNA (537bp) protein (179aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6G2_9EURY
tRNA 2'-O-methylase
sw_4_scaffold_733_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3896..4414
DNA (519bp) protein (173aa)
Transcription factor E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM19_9EURY
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
transcription initiation factor IIE, alpha subunit
sw_4_scaffold_733_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4414..5079
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML73_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45479.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_733_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5076..5840
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJE6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45478.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_733_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6195..7898)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45477.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_733_11
unknown

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8152..8490
DNA (339bp) protein (113aa)

This feature has no annotations

Displaying 11 items

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