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sw_4_scaffold_7536

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_7536_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..407)
DNA (405bp) protein (135aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00282};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYT3_9EURY
MarR family transcriptional regulator
sw_4_scaffold_7536_2
unknown

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736..1041
DNA (306bp) protein (102aa)

This feature has no annotations

sw_4_scaffold_7536_3
unknown

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1159..1386
DNA (228bp) protein (76aa)

This feature has no annotations

sw_4_scaffold_7536_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1727..2131
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BTC7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ13367.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_4_scaffold_7536_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2715..3686)
DNA (972bp) protein (324aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1227455 species="Archaea
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBL5_9EURY
sw_4_scaffold_7536_6
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3772..4140
DNA (369bp) protein (123aa)
id=24654456 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24654456 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
sw_4_scaffold_7536_7
unknown

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comp(4304..4456)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_4_scaffold_7536_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4822..5379
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_7536_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5376..5732
DNA (357bp) protein (119aa)
Type 11 methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N032_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:EMA50000.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
trans-aconitate 2-methyltransferase
sw_4_scaffold_7536_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5729..5986
DNA (258bp) protein (86aa)
Type 11 methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N032_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:EMA50000.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
trans-aconitate 2-methyltransferase
sw_4_scaffold_7536_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5990..6802)
DNA (813bp) protein (271aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1227456 species="Archaea
endA; tRNA splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS7_9EURY
Displaying 11 items

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