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sw_4_scaffold_821

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_821_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..197)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJX9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45014.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_821_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

290..532
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7W6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53658.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_821_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(555..836)
DNA (282bp) protein (94aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH38_9EURY
sw_4_scaffold_821_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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956..2659
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45017.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_821_5
unknown

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comp(2750..2920)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_4_scaffold_821_6
R_NC10_66_22, NC10, Bacteria

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2964..3308
DNA (345bp) protein (115aa)
NUDIX hydrolase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKQ2_HALMO
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
NUDIX hydrolase
sw_4_scaffold_821_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3305..3973)
DNA (669bp) protein (223aa)
Putative RNA methylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAH5_9EURY
Putative RNA methylase {ECO:0000313|EMBL:EMA53655.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
RNA methylase
sw_4_scaffold_821_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4075..5019
DNA (945bp) protein (315aa)
Alpha/beta hydrolase fold-3 domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY3_9EURY
Alpha/beta hydrolase fold-3 domain-containing protein {ECO:0000313|EMBL:EMA45019.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
alpha/beta hydrolase fold-3 domain-containing protein
sw_4_scaffold_821_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5211..6140
DNA (930bp) protein (310aa)
NADH-dependent flavin oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7W2_9EURY
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:EMA53653.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
NADH-dependent flavin oxidoreductase
sw_4_scaffold_821_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6306..7091
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45021.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_821_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7253..8089
DNA (837bp) protein (279aa)
Aldo/keto reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N713_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA53651.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
aldo/keto reductase
sw_4_scaffold_821_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8374..9513
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HV28_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67499.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_4_scaffold_821_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9553..9966)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAH0_9EURY
Suspect SCG annotation. See neighboring gene [sw_4_scaffold_821_14].
Uncharacterized protein {ECO:0000313|EMBL:EMA53650.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
diphthamide synthase subunit DPH2
sw_4_scaffold_821_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9939..10550)
DNA (612bp) protein (204aa)
dph2; S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase (EC:2.5.1.-)
Diphthamide biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI72_9EURY
Diphthamide biosynthesis protein {ECO:0000313|EMBL:EMA45023.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
sw_4_scaffold_821_15
unknown

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10703..10975
DNA (273bp) protein (91aa)

This feature has no annotations

sw_4_scaffold_821_16
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11167..11748)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XU37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY64916.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_4_scaffold_821_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12046..12708
DNA (663bp) protein (221aa)
Serine esterase (EC:3.1.1.1)
Phospholipase/carboxylesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH47_9EURY
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EMA45026.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
sw_4_scaffold_821_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12689..13183
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH29_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45027.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_821_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13723..14553
DNA (831bp) protein (277aa)
Beta-lactamase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N709_9EURY
Beta-lactamase {ECO:0000313|EMBL:EMA53646.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
hypothetical protein
sw_4_scaffold_821_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14868..15914
DNA (1047bp) protein (349aa)
aceA; isocitrate lyase (EC:2.7.8.23)
Isocitrate lyase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ0_9EURY
Isocitrate lyase {ECO:0000313|EMBL:EMA45029.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
sw_4_scaffold_821_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16079..16756
DNA (678bp) protein (226aa)
aceB1; malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N966_9EURY
Malate synthase {ECO:0000313|EMBL:EMA53644.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Displaying 21 items

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