ggKbase home page

sw_4_scaffold_851

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_851_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..243
DNA (243bp) protein (81aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAM5_9EURY
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EMA42842.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
putative metallo-beta-lactamase family hydrolase
sw_4_scaffold_851_2

Not on your lists

544..2211
DNA (1668bp) protein (556aa)
Extracellular solute-binding protein family 1 n=1 Tax=halophilic archaeon DL31 RepID=G2ML35_9ARCH
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEN05512.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_851_3

Not on your lists

2242..3186
DNA (945bp) protein (315aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2ML34_9ARCH
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN05511.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_851_4

Not on your lists

3188..4057
DNA (870bp) protein (290aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MK88_9ARCH
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN05510.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_851_5

Not on your lists

4136..5329
DNA (1194bp) protein (398aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:AEN05509.1}; EC=3.6.3.20 {ECO:0000313|EMBL:AEN05509.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Glycerol-3-phosphate-transporting ATPase n=1 Tax=halophilic archaeon DL31 RepID=G2MK87_9ARCH
sw_4_scaffold_851_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5642..5980
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=1132509 species="Archaea; Euryarchaeota;
peptidyl-tRNA hydrolase, PTH2 family (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSL0_9EURY
sw_4_scaffold_851_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5999..6811)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93174.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_4_scaffold_851_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6938..8356
DNA (1419bp) protein (473aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBS6_9EURY
tRNA pseudouridine synthase, TruD family
sw_4_scaffold_851_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8396..9121
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_851_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9176..9457
DNA (282bp) protein (94aa)
50S ribosomal protein L37Ae n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMW2_9EURY
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
50S ribosomal protein L37Ae
sw_4_scaffold_851_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9454..9588
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P n=2 Tax=Halococcus RepID=M0MM00_9EURY
sw_4_scaffold_851_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9590..9847
DNA (258bp) protein (86aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM25_9EURY
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:EMA46716.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
hypothetical protein
sw_4_scaffold_851_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9969..10211
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQF9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46715.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_851_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10359..10769
DNA (411bp) protein (137aa)
Prefoldin subunit beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPQ7_9EURY
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
pfdB; prefoldin beta subunit
sw_4_scaffold_851_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10770..11012
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEB9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55434.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_851_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11217..12164)
DNA (948bp) protein (316aa)
Putative HTH-type transcriptional regulatory protein C450_04057 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCA8_9EURY
Putative HTH-type transcriptional regulatory protein C450_04057 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
XRE family transcriptional regulator
Displaying 16 items

View Taxonomy