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sw_4_scaffold_1256_12

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: 7180..7731

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 183.0
  • Bit_score: 315
  • Evalue 4.60e-83
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 183.0
  • Bit_score: 315
  • Evalue 3.30e-83
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 182.0
  • Bit_score: 248
  • Evalue 1.10e-63

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGCGACTGTTCGTGAGCGTCGATCTCGACGGGCTCGTCGGGGAGATCGCCGATGTCCAGGAAACGATCGCCGACGCGAGCGGGGTCCGACGCACCGATCCCGGGAACGTCCACGTGACGCTGAAATTTCTCGGGGAAGTCGAAGACGAGCGAGTTCCGGACCTCGCGGCGGAACTGGCTGAGGCGATCGACGGGGCAGGTGTCGATTCGTTCACTGCTACGTTCGGCGGGCTCGGCGCGTTCCCGAGCGAGGAGTACATCCGGGTACTCTGGGTCGGCGTCCGCGAGGGTGGCGACGAGCTGGCCAGGCTCCACGAAGCGATCGAGGACCGAACTACCGAGATGGGGTTCGATCCCGCTGATCACGAGTTCACGCCGCACGCGACGATCGCCAGGATGGACCACGCTGGCGGCAAGGAGCGGGTCCAGCGCGCGCTCCGTGAAACCGATCGCACGGTCGGAACACTCGACGTGAACGAGGTTCGGCTGACCGAGAGCGTGCTCGATGACGACGGACCGGAGTACACCACCGTCAAGCGATTCGAGTTGTGA
PROTEIN sequence
Length: 184
MRLFVSVDLDGLVGEIADVQETIADASGVRRTDPGNVHVTLKFLGEVEDERVPDLAAELAEAIDGAGVDSFTATFGGLGAFPSEEYIRVLWVGVREGGDELARLHEAIEDRTTEMGFDPADHEFTPHATIARMDHAGGKERVQRALRETDRTVGTLDVNEVRLTESVLDDDGPEYTTVKRFEL*