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sw_4_scaffold_1256

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1256_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..210)
DNA (210bp) protein (70aa)
NMD3 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBG7_9EURY
NMD3 family protein {ECO:0000313|EMBL:EMA55317.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
NMD protein affecting ribosome stability and mRNA decay
sw_4_scaffold_1256_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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347..1216
DNA (870bp) protein (290aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protease HtpX homolog n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEG7_9EURY
heat shock protein HtpX
sw_4_scaffold_1256_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1897..2208
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_1256_4
unknown

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comp(2389..2643)
DNA (255bp) protein (85aa)

This feature has no annotations

sw_4_scaffold_1256_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2749..3321
DNA (573bp) protein (191aa)
DNA repair and recombination protein RadA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBS7_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
DNA repair and recombination protein RadA
sw_4_scaffold_1256_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3636..4055)
DNA (420bp) protein (140aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAJ1_9EURY
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EMA42807.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
SUF system FeS assembly protein, NifU family
sw_4_scaffold_1256_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4111..5358)
DNA (1248bp) protein (416aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
Cysteine desulfurase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT4_9EURY
cysteine desulfurase, SufS subfamily protein
sw_4_scaffold_1256_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5424..5570)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42802.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_1256_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5711..5995
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42801.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_1256_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6004..6297)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42800.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_1256_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6278..7126)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55330.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
TPR repeat-containing protein
sw_4_scaffold_1256_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7180..7731
DNA (552bp) protein (184aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY
2'-5' RNA ligase
sw_4_scaffold_1256_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8171..8323
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCN7_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
rpl39e; 50S ribosomal protein L39e
sw_4_scaffold_1256_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8320..8598
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF2_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
ribosomal protein L31E
sw_4_scaffold_1256_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8600..9265
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF65_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
translation initiation factor eIF-6
sw_4_scaffold_1256_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9773..10567
DNA (795bp) protein (265aa)
Signal recognition particle receptor FtsY n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBI4_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobac
signal recognition particle-docking protein ftsy
Displaying 16 items

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