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sw_4_scaffold_2100_14

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(8721..9875)

Top 3 Functional Annotations

Value Algorithm Source
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 391.0
  • Bit_score: 450
  • Evalue 5.00e-124
Diaminopimelate decarboxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N810_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 384.0
  • Bit_score: 643
  • Evalue 1.40e-181
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 384.0
  • Bit_score: 643
  • Evalue 2.00e-181

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1155
CGCGTGCGCGAGAACGCCGACCGACTCCGGCGGGCGTTCCCCGACGCCGAGATCGGGTACGCAGTGAAGGCGAACGCCATCGGGTGTGTCCTGGAGACGATCGCCGACACGGGGTTGGGGGCCGAGTGCGCCGCCGCCGGCGAGGTCGTCCGTGCGCTCGATGCAGGGTTCGACCGGGTTCGCTACACCGCCGTCAACCCACCCGCTCGGGATCTCGATCGCGTCGTCGATCTCGCTGCCGAGCACGATATCGCGATCACGATCGGCGCGAGCGACACCCTCGACCGTCTCGCCGAGCGCGGCTGGGCGGGAGAGCTGTTCGTCCGAGTGAACCCTGGCGTCGGCGCGGGCCACCACGCGAAGGTACGGACGGGAACCGATCCGAAGTTCGGGGTGCCAGGCGAGCGCGCTGCGGCCGTCGTGAGCAAGGCCGCCGAGCGCGCGTTCGACGTTCGCGGCCTTCACGCCCACGCCGGCAGCGGGATCCTCGACGCCGACGACCTCGACACCCACCGCGCGCTGGTCGCCCGGATGGGTGAACTGACCGCCGAAATCGTCGATCGGGGCATCGATCTCGACACCGTGATCGTCGGTGGCGGGTTCGGGGTTCCCTACCGCGAGTCGGCATCGCCGCTCGATCTCGACTCGCTCGCCACGGCTACGTGCGAGGCACTCGGCGGTGTCGACGGCTCGGGCGACCCCGGCGTGAAGCTCGGGATCGAGCCTGGCCGCTACCTCGTCGCCGACGCGGGCGTGCTGGTGACCCGAGTGAATACGGTGAAAGAAACGCCCGAGACCACGGTCGTCGGCGTCGACGCCGGGATGACTGATCTCCTCCGGCCCGCGCTGTACGACGCCCACCACGCGATCCGGTCGCTCGCGCGGGACGCCGGAGAGCGCGAGACGATGTCGACAGCGGTTGCGGGGCCGGTCTGTGAGTCCGCCGACGCGCTCGCACGGGGTCGTGAGCTTGCCGCGCCGACGCGCGGCGATCTCCTCGCGGTCGGGAACGCCGGCGCGTACGGGTACGAGATGGCGAACACGTACAACTCCCGGCCCCGGCCGGCAGTGGTCGCGCTCGACGACGGCGAGTCGCGGGTCTGTGTGCGCCGCGAGACGATCGACGATCTCACGCGCCTGGAGGTCGAGCGATGA
PROTEIN sequence
Length: 385
RVRENADRLRRAFPDAEIGYAVKANAIGCVLETIADTGLGAECAAAGEVVRALDAGFDRVRYTAVNPPARDLDRVVDLAAEHDIAITIGASDTLDRLAERGWAGELFVRVNPGVGAGHHAKVRTGTDPKFGVPGERAAAVVSKAAERAFDVRGLHAHAGSGILDADDLDTHRALVARMGELTAEIVDRGIDLDTVIVGGGFGVPYRESASPLDLDSLATATCEALGGVDGSGDPGVKLGIEPGRYLVADAGVLVTRVNTVKETPETTVVGVDAGMTDLLRPALYDAHHAIRSLARDAGERETMSTAVAGPVCESADALARGRELAAPTRGDLLAVGNAGAYGYEMANTYNSRPRPAVVALDDGESRVCVRRETIDDLTRLEVER*