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sw_4_scaffold_2100

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2100_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..313)
DNA (312bp) protein (104aa)
Blue copper domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N803_9EURY
Blue copper domain protein {ECO:0000313|EMBL:EMA53698.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
blue copper domain protein
sw_4_scaffold_2100_2
unknown

Not on your lists

329..523
DNA (195bp) protein (65aa)

This feature has no annotations

sw_4_scaffold_2100_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(492..1151)
DNA (660bp) protein (220aa)
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGY1_9EURY
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent {ECO:0000313|EMBL:EMA44971.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
phosphoribosylglycinamide formyltransferase
sw_4_scaffold_2100_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1148..2014)
DNA (867bp) protein (289aa)
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGY1_9EURY
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent {ECO:0000313|EMBL:EMA44971.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
phosphoribosylformylglycinamidine synthase, clade II
sw_4_scaffold_2100_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2057..2488)
DNA (432bp) protein (144aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAL5_9EURY
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EMA53700.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
phosphoesterase PA-phosphatase related
sw_4_scaffold_2100_6
unknown

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comp(2827..2937)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_4_scaffold_2100_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3063..4448
DNA (1386bp) protein (462aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N754_9EURY
adenylosuccinate lyase
sw_4_scaffold_2100_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4488..5138)
DNA (651bp) protein (217aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI02_9EURY
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EMA44968.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
2-dehydro-3-deoxyphosphogluconate aldolase
sw_4_scaffold_2100_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5374..5847)
DNA (474bp) protein (158aa)
Putative phosphate permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCD6_HALMO
Putative phosphate permease {ECO:0000313|EMBL:EMA49968.1}; Flags: Fragment;; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
pitA; putative phosphate permease
sw_4_scaffold_2100_10
unknown

Not on your lists

5984..6286
DNA (303bp) protein (101aa)

This feature has no annotations

sw_4_scaffold_2100_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6275..6442)
DNA (168bp) protein (56aa)
Putative phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9C0_9EURY
Putative phosphate permease {ECO:0000313|EMBL:EMA53704.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pitA; phosphate permease
sw_4_scaffold_2100_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6646..7773)
DNA (1128bp) protein (376aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N759_9EURY
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EMA53706.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
peptidase M20
sw_4_scaffold_2100_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7777..8724)
DNA (948bp) protein (316aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1227456 species="Archaea; Eury
Diaminopimelate epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N700_9EURY
diaminopimelate epimerase
sw_4_scaffold_2100_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8721..9875)
DNA (1155bp) protein (385aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N810_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
Displaying 14 items

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