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sw_4_scaffold_2135_4

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(2972..3529)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME86_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 161.0
  • Bit_score: 282
  • Evalue 4.10e-73
Arabinose efflux permease {ECO:0000313|EMBL:EMA44036.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 161.0
  • Bit_score: 282
  • Evalue 5.70e-73
arabinose efflux permease similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 150.0
  • Bit_score: 175
  • Evalue 1.50e-41

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 558
TTGGAAGTCCTTCCGGGATCGGCCGCACGCCATCGTGCGGTCGCACCGGTAAACGCTTCCAACCGCCCCTATCAGGGGGTAGTCGGCAGCTACACCGACCGGGTGGGCCACAAACACCACTTCGTGATCGCGGGTGCGCTGGTCTACGCGCTCGGCGCGGCGCTCATCCCACTCGCCGAATTCGCGGAGGGGGTCTTCCCCGCGCTCTCGACGGCTGCTTTCGGCGGGATCGCGCTTCCACCCGCCTTCTTCGTACTGTTCGCCGCGTTCGCGGTCGTCGGTGTCGTCGACAGCCTCCGGCTTCCCGCGAGCATGGCGCTGTTCGTCGAGGAGGGCGAGTACTTCGACGCGGTCGCGGCGAGCCTCTCGCTGCACTCGATCGGATGGAAGGTCGGCCAGGTCGCCGGTCCCTTCACCGTGGGCGCGATCTGGGACGCGACCAGCGTGTTCGTCGCCTTCCTGACTGCTGCCGGGTTCATCGTGATCGCCACGGGCGTCTTCGCCGCGTTCTACAGCCTCGACCCTGCCCCCGGCGCGACGCCTGCGCCCGGCGACTGA
PROTEIN sequence
Length: 186
LEVLPGSAARHRAVAPVNASNRPYQGVVGSYTDRVGHKHHFVIAGALVYALGAALIPLAEFAEGVFPALSTAAFGGIALPPAFFVLFAAFAVVGVVDSLRLPASMALFVEEGEYFDAVAASLSLHSIGWKVGQVAGPFTVGAIWDATSVFVAFLTAAGFIVIATGVFAAFYSLDPAPGATPAPGD*