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sw_4_scaffold_2135_5

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(3478..4017)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME86_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 172.0
  • Bit_score: 288
  • Evalue 5.50e-75
Arabinose efflux permease {ECO:0000313|EMBL:EMA44036.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 172.0
  • Bit_score: 288
  • Evalue 7.70e-75
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 159.0
  • Bit_score: 214
  • Evalue 2.80e-53

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 540
ATGCGCGTGCTCCAGGGCTTCGGCGCGAGCATCCTCTGGATCACCGGTTCGGCGGTCGTCGGCGAACTCAGCCCCGGCGAGGAACGCGGGAAGTGGCTCGGGACCTACCGGGTGAGCGCGTTTTCGAGCCTCGCCGGCGACCTCGTCGGCGGGATCTTGCTGTTCGTCTACGGGTTCACCCTGACGTACGCCGTCCTGAGCGTCGTCACGATCGCCGCGACGATCTCGGTGTTTCTCTTCCTCCGGGACAACCCCGGCGGACGGAGCGATCCCGAGGAGGCAACCGGCGTCGAGACCCTCCGCCGGCTGCTCGATCGGGCGGCGATCCGCGCGCTCGTGGTCTTCCGGCTCGGCCTCAGTTTCGGGAAGACGGCGGTGATCATCTTCCTCCCGATCTACGCCCGAACCGAGTTCGGGATGAACCCTTTCCTCGTCGGGATCGTGCTCGCGGGCGGGAAACTCACCAAGTCGCTGCTTCATAGGGTCGGTTGGAAGTCCTTCCGGGATCGGCCGCACGCCATCGTGCGGTCGCACCGGTAA
PROTEIN sequence
Length: 180
MRVLQGFGASILWITGSAVVGELSPGEERGKWLGTYRVSAFSSLAGDLVGGILLFVYGFTLTYAVLSVVTIAATISVFLFLRDNPGGRSDPEEATGVETLRRLLDRAAIRALVVFRLGLSFGKTAVIIFLPIYARTEFGMNPFLVGIVLAGGKLTKSLLHRVGWKSFRDRPHAIVRSHR*