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sw_4_scaffold_4173_2

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(1616..3403)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 595.0
  • Bit_score: 1114
  • Evalue 0.0
rpoA1; DNA-directed RNA polymerase subunit A' (subunit A) (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 581.0
  • Bit_score: 929
  • Evalue 4.40e-268
DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG30_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 595.0
  • Bit_score: 1112
  • Evalue 0.0

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1788
GTGAACTTCTCGGCCCGTACTGTTATCTCGCCGGACCCGACCCTCAGCCTCAACGAGGTCGGCGTTCCCGAACGGGTCGCGGAGGAGATGACCCAGACGATGAACGTCAACGAGCGCAACATCGAGGAAGCGCGCCAGTACGTTCGCAACGGCGCGGAGACCCATCCCGGCGCGAACCGGGTCATCCGCCCCGACGGCAAGGTGATGAAGATCTTAGACCAGGCGAAAGAGGAGCTCGCCGAGCGGATCGAGCCGGGCTGGCAGGTCCAGCGCCACCTCTCCGATGGCGACATCGTGATCTTCAACCGCCAGCCGTCGCTCCACCGAATGAGTATCATGGCCCACGAGGTCGTGGTGATGCCGTACAAGACCTTCCGGCTGAACACGACCGTCTGTCCGCCCTATAATGCTGACTTCGACGGCGACGAGATGAACATGCACGCCCTCCAGAACGAGGAGGCGCGTGCGGAGGCCCGCGTGCTGATGCGTGTCCAAGAGCAGATCCTCTCGCCCCGCTTCGGCGGGAACATCATCGGCGCGATCCAGGACCACGTCTCGGGAACCTATCTCCTCACCCACGACGATCCCGAGACCGGCGGGGTGCCCCGCTTCAACGAGACCCAGGCCCTCGATCTGCTCCGGGCGACCGCGGTCGACGGGCTGCCCGACCCCGACGGCGAGACGGAGACCGGTCCGTACTGGACGGGCCGGACGATCTTCTCCGAACTCCTGCCGGACGGACTCGATCTCGAGTTCACCTCGTCGGCCGGCGACACGGTCGTGATCGAGGACGGCCAGCTCCTCGAGGGGACCGTCGACGAGGACGCGGTCGGGGCGTTCGGCGGCGAGGTCGTCGATACCGTCGTGAAAAAGCACGGCGAGACCCGCGCCCGCGTACTTATCAACGAGGTCGCGTCGCTGGCGATGCGGTCGATAATGCACTTCGGGTTCTCGATCGGGATCGACGACGAGTCGATCTCCGCCGACGCCGAGACCCGGATCGACGAGAGCATTGCGAATGCCTACGAGCGAATCGACGAACTCATCACGACCTACGAGAACGACGAACTCGAATCGCTGCCAGGGCGAACGGTCGACGAGACCCTCGAAATGAAGATCATGCAGACGCTCGGGAAGGCCCGTGACTCGGCGGGCGACATCGCGGAGGACCACTTCGCGGAGGACAATCCCGCGGTGGTCATGGCCGAATCCGGCGCGCGTGGTTCGATGCTCAACCTCACCCAGATGGCGGCCTGCGTCGGCCAGCAGTCGGTCCGTGGCGAGCGGATCAACCGCGGGTACGAGGACCGCACCCTCAGTCACTACCGGCCGAACGACCTCTCGGCGGACGCTCACGGGTTCGTCGAGCACTCCTACCGGAGCGGGCTCGGGCCGCGGGAGTTCTTCTTCCACGCGATGGGCGGCCGCGAGGGGCTCGTGGACACGGCGGTCCGGACCTCGAAGTCGGGCTACCTCCAGCGCCGGCTGATCAACGCGCTGTCGGAGCTCGAAACCCAGTACGACGGCACCGTGCGGGACACCAACGACAACATCGTCCAGTTCGAGTTCGGCGAGGACGGCACCAGCCCGGTGGAGGTCTCCTCCAGCGCCGACCACGAGATCGACGTCGAATCGATCGCCGACGACGTTCTCGCGGCGGAGTTCGAGGACGAGGGCGAGGCGTTTATCGCCGAGCCGACGACCAACCTCTCGGAGGACGCCGACGACCGGATGATCGACGATCGTACGGATTCGCCGATCGAGGTGCCACAGGTGAACGATGACTGA
PROTEIN sequence
Length: 596
VNFSARTVISPDPTLSLNEVGVPERVAEEMTQTMNVNERNIEEARQYVRNGAETHPGANRVIRPDGKVMKILDQAKEELAERIEPGWQVQRHLSDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQILSPRFGGNIIGAIQDHVSGTYLLTHDDPETGGVPRFNETQALDLLRATAVDGLPDPDGETETGPYWTGRTIFSELLPDGLDLEFTSSAGDTVVIEDGQLLEGTVDEDAVGAFGGEVVDTVVKKHGETRARVLINEVASLAMRSIMHFGFSIGIDDESISADAETRIDESIANAYERIDELITTYENDELESLPGRTVDETLEMKIMQTLGKARDSAGDIAEDHFAEDNPAVVMAESGARGSMLNLTQMAACVGQQSVRGERINRGYEDRTLSHYRPNDLSADAHGFVEHSYRSGLGPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTNDNIVQFEFGEDGTSPVEVSSSADHEIDVESIADDVLAAEFEDEGEAFIAEPTTNLSEDADDRMIDDRTDSPIEVPQVNDD*