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sw_4_scaffold_4173_3

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(3448..4488)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 326.0
  • Bit_score: 628
  • Evalue 4.60e-177
rpoA; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 326.0
  • Bit_score: 537
  • Evalue 2.20e-150
DNA-directed RNA polymerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYH8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 326.0
  • Bit_score: 628
  • Evalue 3.30e-177

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1041
ATGAGCACGAACGCAACACCCAAGGAGATCGGTTCGATCGACTTCGGGCTGATGAACCCGGAGGAGTACCGCGAGATGAGCGCGACGAAGATCATCACCGCCGACACCTACGACGACGACGGCTACCCCATCGACATGGGGCTGATGGACCCTCGACTGGGGGTGATCGACCCCGGCCTGGAGTGCAAGACCTGCGGTCAGCACTCGGGATCCTGCAATGGCCACTTCGGCCACATCGAACTCGCCGCGCCCGTGATTCACGTCGGGTTCACGAAGCTGATGCGACGACTGCTCCGTGGCACCTGCCGGGAGTGTTCGCGGCTGCTGCTCGACGAAGCCGAGCGCAACGAGTTCGCCGAGCGTCTCCAGCGAGCGCGCGAACTCGACAACGATGTTAATGACGTGACGAAGGCGGCGATCCGCCAGGCCAGAAAGAAGGATCGGTGTACGTACTGCGGCGAGGAGCAGTACGACATCCAACACGAGAAGCCGACGACGTATTACGAGGTTCAAGATGTCCTCGCGGCGGAATACCCCGAACTGATCGCCGCGGCGATGCAGCCCGATGAGGAGTCGAGCGATCCCGGGAGTTCGCCCCAGCAGCTCGCCGAGGAGACCGACATCGACCTCTCGCGGATCAACGACATTCTGGGTGGGGAGTTCCGGCCGCGCGAGGCCGACCGCGAGGCGATCGAGCGCGCGCTCGACGTCGACCTCACCGAGGAGGACATGAACAAGCTGATGCCGAGCGATGTCCGGGACTGGTTCGAGGCGATCCCGGACGAGGACGTCGAAGTGCTCGGGATCGACCCCGAGCGCTCGCGGCCGGAGTGGATGGTCCTCACCGTGCTTCCGGTGCCGCCCGTCACCGCCCGGCCGTCGATCACCCTCGACAACGGCCAGCGAAGCGAGGACGACCTGACCCACAAACTCGTGGACATCATCCGCACGTCACGACGTTCATGGACAACGAGATCTCCGGCACGCCGCCCGCGCGACACCGCTCGGGCCGCCCCCTCAAGACCCTCTCCCAGCGGCTGA
PROTEIN sequence
Length: 347
MSTNATPKEIGSIDFGLMNPEEYREMSATKIITADTYDDDGYPIDMGLMDPRLGVIDPGLECKTCGQHSGSCNGHFGHIELAAPVIHVGFTKLMRRLLRGTCRECSRLLLDEAERNEFAERLQRARELDNDVNDVTKAAIRQARKKDRCTYCGEEQYDIQHEKPTTYYEVQDVLAAEYPELIAAAMQPDEESSDPGSSPQQLAEETDIDLSRINDILGGEFRPREADREAIERALDVDLTEEDMNKLMPSDVRDWFEAIPDEDVEVLGIDPERSRPEWMVLTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRTSRRSWTTRSPARRPRDTARAAPSRPSPSG*