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sw_4_scaffold_4173_4

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(4517..6343)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=62319 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 608.0
  • Bit_score: 1187
  • Evalue 0.0
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 608.0
  • Bit_score: 1117
  • Evalue 0.0
DNA-directed RNA polymerase n=3 Tax=Halococcus saccharolyticus RepID=C5NSC9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 608.0
  • Bit_score: 1187
  • Evalue 0.0

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1827
ATGAGCCGGGCACGCGACGCGAAAGTCTACGTCAACGGCAGCCTGGTCGGCACGCACGACCAGCCCGAACAGCTCGCCCACCAGGTCCGCGAGGCGCGACGCCGCGGGGACGTGGCCGAGACGGTGAACGTCTCGGTCAAGGACTACACCGACGAGGTCATCATCAATGCCGACGCCGGCCGGGCGCGACGGCCGTTGATCGTGGTCGAGGAGGGCGAACCGCTCATCACCGAGGACGAAGTCGAGGCGCTCACCGACGGCGACACCGAGTTCGAGGATCTCGTCGATCGGGGCTACGTCGAGTTCATCGACGCCGAGGAGGAAGAGGACATCCTCGTCGGCGTCGACGAGGACGACCTCACCGAGGATCACACTCACCTCGAGATCGACCCACAGCTCATCTTCGGGATCGGTGCGGGGATGATCCCCTACCCCGAGCACAACGCCTCGCCCCGAATCACGATGGGGGCGGGAATGATCAAGCAGTCTCTGGGCCTGCCGAGCGCGAACTATCGCATTCGGCCCGACACCCGCCAGCATCTGCTGCACTACCCGCAGCTCTCGATGGTCAAGACCCAGACCACCGAGCAGATCGGCTACGACGACCGCCCCGCGGCCCAGAACTTCGTGGTCGCGGTCATGAGCTACGAGGGGTTCAACATCGAGGACGCACTGGTGTTGAACGAGGGCTCGGTCGATCGAGCACTCGCGCGCTCGCATTTCTTCCGGACGTACGAGGGCGAGGAACGCCGGTATCCGGGCGGCCAGGAGGACCGCTTCGAGATCCCCGACGACGACGTGCGCGGCGCGCGGGGCGAGGAGGCGTACACCCACCTCGACGAGGACGGGCTCGTCAATCCGGAAACCCCGGTCGACGAGAGCGCCGTGTTGCTGGGGAAGACCAGCCCCCCGAGGTTCCTCGAAGAGCCCGACGACATGGGCGGCCTCTCGCCACAGAAACGCCGCGAGACCAGCGTGACGATGCGCTCGGGCGAGTCGGGCGTCGTCGACACGGTGACGCTGATGCAGGGCGAGGACGGCTCGAAACTCTCGAAGGTCTCGGTTCGGGACCAGCGGATCCCCGAGCTCGGCGACAAGTTCGCGAGTCGGCACGGCCAGAAGGGCGTCGTCGGCCACATCGCGCCCCAGGAGGACATGCCCTTCACCGAAGAGGGTGTCGTGCCCGACCTCATCATCAACCCGCACGCGCTGCCCTCGCGGATGACCGTCGGCCACGTGCTGGAGATGCTCGGCGGCAAGGTCGGCTCGCTGGAGGGTCGGCGGGTCGACGGCACGGCCTTCACCGGCGAGGACGAAGCGGAGCTCCGCGAATCGCTCGAAGAGCACGGGTTCGATTCGAGCGGGAAGGAGATCATGTACTCCGGCGTGACGGGCGAGAAGATCGACGCCGAGATCTTCGTCGGGACCATCTTCTATCAGAAGCTCTATCACATGGTCTCGAACAAGATCCACGCTCGCTCTCGCGGACCGGTCCAGGTGCTCACGCGCCAGCCGACCGAAGGCCGCGCCCGCGAGGGTGGCCTCCGGGTCGGCGAGATGGAGAGAGATGTGCTGATCGGGCACGGTGCGGCGATGGCGCTGAAAGAGCGCCTGCTCGACGAGTCCGACCGGGAGTTCGTCTACGTCTGCGGCGAATGCGGGATGAGCGCGGTCGAGAACGTCGAGCAGCGTCGGGTGTACTGCCCGAACTGCGGGGAGGAGACCGAGATCCACGAGATCGAGATGAGCTACGCGTTCAAACTCCTGCTCGACGAGATGAAGGCGCTGGGGATCGCCCCGCGGCTCGAACTCGAAGACGCGGTCTGA
PROTEIN sequence
Length: 609
MSRARDAKVYVNGSLVGTHDQPEQLAHQVREARRRGDVAETVNVSVKDYTDEVIINADAGRARRPLIVVEEGEPLITEDEVEALTDGDTEFEDLVDRGYVEFIDAEEEEDILVGVDEDDLTEDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMIKQSLGLPSANYRIRPDTRQHLLHYPQLSMVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVLNEGSVDRALARSHFFRTYEGEERRYPGGQEDRFEIPDDDVRGARGEEAYTHLDEDGLVNPETPVDESAVLLGKTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMQGEDGSKLSKVSVRDQRIPELGDKFASRHGQKGVVGHIAPQEDMPFTEEGVVPDLIINPHALPSRMTVGHVLEMLGGKVGSLEGRRVDGTAFTGEDEAELRESLEEHGFDSSGKEIMYSGVTGEKIDAEIFVGTIFYQKLYHMVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDREFVYVCGECGMSAVENVEQRRVYCPNCGEETEIHEIEMSYAFKLLLDEMKALGIAPRLELEDAV*