ggKbase home page

sw_4_scaffold_822_2

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: 559..1998

Top 3 Functional Annotations

Value Algorithm Source
Deoxyribodipyrimidine photolyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 479.0
  • Bit_score: 902
  • Evalue 1.60e-259
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA50838.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 479.0
  • Bit_score: 902
  • Evalue 2.30e-259
phr_2; deoxyribodipyrimidine photolyase similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 475.0
  • Bit_score: 626
  • Evalue 6.40e-177

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1440
ATGACCGACACCGCCGTTGCCTGGTTCCGAACCGATCTCCGATCCCACGACAACGAGGCGCTCGTCCGCGCCGTCGAAGAGCACAGTAGTGTGCTCCCGGTGTACTGCTTCGACCCGCGCGAGTTCGGCGAGACGATGTTCGGACTCGAAAAGACCGGTCCCTACCGAGCGGAGTTCCTAGTCGAGAGCATCCGCGATCTTCGCGAATCGCTGCGCGAGGCGGGTGGCGACCTCCTCGTTCGGCAGGGAAAGCCCGAGAACGTCGTCCCCGAACTCGCTGCCGAACACGGGGCCGAGACCATTCACTACCACGCCACGCCAGCGACCGAGGAGCGCGCCGTCGAGAACGGCGTCGTCGACGGACTCGACGAGCGCGGGATCGATAGTCGTGACTTCTGGGGTAAGACGCTGTACCACATCGAGGATCTCCCGACGCGCGTCGAGCGGATCGACGACACGTTCACACCGTGGCGACAGACCGTCGAGGACGGGGCGACGGTGCGCGATCCCCTCGATTCCCCCACGTCGATCGCTCTTCCCGAGAGCGCTGGCGACGAGCCGGGCACGATCCCGACGCCAGACGACCTCGGAATCGAGAAACAAGCACCGGACGATCGGGCGGCGACCGACTTCGCCGGCGGCGAGTCCGCCGGCCTCCGTCGGCTGACGGAGTACGTCTGGGAGGACGACCACCTGCGCGAGTACAAGGAGACCCGCAACGGACTGCTGGGTGCGGACTACTCCTCAAAGTTCTCGCCGTGGCTCGCGCTCGGCTGTCTCTCCCCACGGCTGATCCACGAGCACGTCGAGCGCTACGAGCGCGAGCGCGTTGCCAACGACTCGACGTACTGGCTCGTTTTCGAACTCCTCTGGCGCGATTTCATGACGTTCCAGTTCGAAAAACACGGTGCGGACTTCTTCACGCCGACGGGGATCCGAGATGTCGAGAAGAACTGGCAGCGCGACGAGACGGCCTTCGAGCGGTGGGCGGCCGGCGAGACCGGCGTCCCGTTCGTCGATGCCAACATGCGCGAACTCAACAAGACGGGGTTCATGTCGAACCGGGGCCGGCAGAACGTCGCAAGCTTCCTCGCCGACGCGCTCGGGATCGACTGGCGGATGGGGGCGGCGTACTTCGAGTCGCGGCTGGTCGACTACGACGTGTGCTCGAACTGGGGCAACTGGGCGTACCAGGCGGGCGTCGGCAACGACTCGCGCGACGGCTACTTCGACGTGCTCGGCCAGGGCAGACGCTACGATTCGGACGCGGCGTACATCAGACACTGGCTGCCCGAACTCGATTCGCTCCCCGCCGACGCCTGTCACGCACCGTGGCAGCTCTCGGCATCACAACAGGCGATGTACGGCGTGGAGCTCGGCGCGGACTATCCGGAGCCGATGATCGACGTCACGGCTGTTTACGACCGCCTCGACGGCTGA
PROTEIN sequence
Length: 480
MTDTAVAWFRTDLRSHDNEALVRAVEEHSSVLPVYCFDPREFGETMFGLEKTGPYRAEFLVESIRDLRESLREAGGDLLVRQGKPENVVPELAAEHGAETIHYHATPATEERAVENGVVDGLDERGIDSRDFWGKTLYHIEDLPTRVERIDDTFTPWRQTVEDGATVRDPLDSPTSIALPESAGDEPGTIPTPDDLGIEKQAPDDRAATDFAGGESAGLRRLTEYVWEDDHLREYKETRNGLLGADYSSKFSPWLALGCLSPRLIHEHVERYERERVANDSTYWLVFELLWRDFMTFQFEKHGADFFTPTGIRDVEKNWQRDETAFERWAAGETGVPFVDANMRELNKTGFMSNRGRQNVASFLADALGIDWRMGAAYFESRLVDYDVCSNWGNWAYQAGVGNDSRDGYFDVLGQGRRYDSDAAYIRHWLPELDSLPADACHAPWQLSASQQAMYGVELGADYPEPMIDVTAVYDRLDG*