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sw_4_scaffold_822

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_822_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..519
DNA (519bp) protein (173aa)
PrkA cluster protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N156_9EURY
PrkA cluster protein {ECO:0000313|EMBL:EMA50839.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
prkA cluster protein
sw_4_scaffold_822_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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559..1998
DNA (1440bp) protein (480aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW4_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA50838.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
phr_2; deoxyribodipyrimidine photolyase
sw_4_scaffold_822_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2005..2613)
DNA (609bp) protein (203aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYZ6_9EURY
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA50836.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
TetR family transcriptional regulator
sw_4_scaffold_822_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2684..3154)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42438.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical membrane protein (DUF422)
sw_4_scaffold_822_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3283..3477)
DNA (195bp) protein (65aa)
Cold-shock DNA-binding domain-containing protein n=2 Tax=Halococcus RepID=M0MQV7_HALMO
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EMA48102.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
cold-shock DNA-binding domain-containing protein
sw_4_scaffold_822_trna_1
unknown

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comp(3651..3759)
DNA (109bp)
transferRNA
sw_4_scaffold_822_6
unknown

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comp(3784..4533)
DNA (750bp) protein (250aa)

This feature has no annotations

sw_4_scaffold_822_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4635..6602)
DNA (1968bp) protein (656aa)
hbd1; 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU3_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA45775.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
sw_4_scaffold_822_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6909..7328
DNA (420bp) protein (140aa)
acd_6; acyl-CoA dehydrogenase 6 (EC:1.3.99.3)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZV9_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA50833.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
sw_4_scaffold_822_9
unknown

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comp(7398..8210)
DNA (813bp) protein (271aa)

This feature has no annotations

sw_4_scaffold_822_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8158..9513)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N292_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50830.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_822_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9645..10670
DNA (1026bp) protein (342aa)
Deacylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N146_9EURY
Deacylase {ECO:0000313|EMBL:EMA50829.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
deacylase
sw_4_scaffold_822_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10778..11170
DNA (393bp) protein (131aa)
sdhC; succinate dehydrogenase subunit C (EC:1.3.99.1)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM08_9EURY
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EMA45769.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
sw_4_scaffold_822_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11170..11544
DNA (375bp) protein (125aa)
sdhD; succinate dehydrogenase subunit D (membrane anchor protein) (EC:1.3.99.1)
Succinate dehydrogenase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK54_9EURY
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:EMA45768.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
sw_4_scaffold_822_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11550..12425
DNA (876bp) protein (292aa)
sdhB; succinate dehydrogenase iron-sulfur protein subunit (EC:1.3.99.1)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYY5_9EURY
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EMA50826.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloco
sw_4_scaffold_822_15
unknown

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comp(12431..13753)
DNA (1323bp) protein (441aa)

This feature has no annotations

Displaying 16 items

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