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SW_4_Halococcus_67_50

In projects: SW_4  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halococcus  →  Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 201-228 of 228 in total
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contig # features sequence size GC content (%) Cov Coding Density (%) notes
sw_4_scaffold_647
Genus: Halococcus (85.71%)
7 7966 bp 68.50 55.85 83.27
sw_4_scaffold_2867
Species: Halococcus salifodinae (50%)
6 4966 bp 68.51 51.79 71.22
sw_4_scaffold_1169
Genus: Halococcus (92.31%)
13 14260 bp 68.53 54.11 88.61
sw_4_scaffold_1960
Genus: Halococcus (85.71%)
7 5497 bp 68.53 48.11 94.42
sw_4_scaffold_950
Species: Halococcus saccharolyticus (55.56%)
9 7928 bp 68.55 49.05 95.13
sw_4_scaffold_2804
Species: Halococcus salifodinae (62.5%)
8 7692 bp 68.59 46.39 98.09
sw_4_scaffold_1127
Species: Halococcus salifodinae (55.56%)
9 7896 bp 68.60 52.33 87.69
sw_4_scaffold_3559
Species: Halococcus salifodinae (75%)
4 3190 bp 68.62 46.02 90.47
sw_4_scaffold_1562
Genus: Halococcus (87.5%)
8 7037 bp 68.62 51.68 85.86
sw_4_scaffold_629
Species: Halococcus saccharolyticus (71.43%)
7 8681 bp 68.70 49.57 96.83
sw_4_scaffold_3074
Species: Halococcus saccharolyticus (60%)
5 3449 bp 68.77 53.87 81.94
sw_4_scaffold_1147
Species: Halococcus salifodinae (60%)
5 5819 bp 68.84 54.96 89.60
sw_4_scaffold_3167
Genus: Halococcus (66.67%)
6 4295 bp 68.87 46.57 85.10
sw_4_scaffold_3157
Species: Halococcus salifodinae (75%)
4 3400 bp 68.94 47.94 99.44
sw_4_scaffold_2625
Species: Halococcus saccharolyticus (66.67%)
6 6614 bp 68.94 59.16 83.28
sw_4_scaffold_1271
Genus: Halococcus (91.67%)
12 7388 bp 68.94 48.85 92.01
sw_4_scaffold_12420
Species: Halococcus salifodinae (60%)
5 4613 bp 68.96 50.21 90.46
sw_4_scaffold_4775
Species: Halococcus saccharolyticus (57.14%)
7 4642 bp 69.00 50.96 95.13
sw_4_scaffold_282
Species: Halococcus saccharolyticus (53.85%)
13 13260 bp 69.03 58.06 90.81
sw_4_scaffold_4589
Genus: Halococcus (50%)
4 3281 bp 69.13 50.44 90.06
sw_4_scaffold_793
Genus: Halococcus (75%)
12 10968 bp 69.13 52.15 89.75
sw_4_scaffold_3606
Species: Halococcus salifodinae (50%)
4 3156 bp 69.14 59.06 86.31
sw_4_scaffold_3565
Species: Halococcus salifodinae (60%)
5 3186 bp 69.15 44.44 81.45
sw_4_scaffold_600
Species: Halococcus salifodinae (57.14%)
14 8682 bp 69.17 42.96 89.81
sw_4_scaffold_592
Genus: Halococcus (100%)
11 11099 bp 69.24 54.87 91.31
sw_4_scaffold_1620
Species: Halococcus salifodinae (50%)
8 6592 bp 69.25 60.42 91.69
sw_4_scaffold_2100
Species: Halococcus salifodinae (50%)
14 9877 bp 69.46 46.31 88.99
sw_4_scaffold_2485
Species: Halococcus salifodinae (60%)
5 3855 bp 69.47 47.81 89.96
Displaying items 201-228 of 228 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.