ggKbase home page

sw_4_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 61 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_106_1
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..964)
DNA (963bp) protein (321aa)
Histone deacetylase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1E2_NATMM
histone deacetylase
Histone deacetylase {ECO:0000313|EMBL:ADD07401.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 /
sw_4_scaffold_106_2

Not on your lists

comp(1129..2463)
DNA (1335bp) protein (445aa)
acetylornithine transaminase (EC:2.6.1.11) rbh
Acetylornithine transaminase {ECO:0000313|EMBL:AEN05787.1}; EC=2.6.1.11 {ECO:0000313|EMBL:AEN05787.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Acetylornithine transaminase n=1 Tax=halophilic archaeon DL31 RepID=G2MLW0_9ARCH
sw_4_scaffold_106_3

Not on your lists

2706..3908
DNA (1203bp) protein (401aa)
FAD dependent oxidoreductase n=1 Tax=halophilic archaeon DL31 RepID=G2MMW8_9ARCH
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEN06744.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_106_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4032..4736)
DNA (705bp) protein (235aa)
Cyclase family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR79_9EURY
Cyclase family protein {ECO:0000313|EMBL:EFW92987.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
cyclase
sw_4_scaffold_106_5

Not on your lists

4957..6483
DNA (1527bp) protein (509aa)
Na+/solute symporter n=1 Tax=halophilic archaeon DL31 RepID=G2MMZ9_9ARCH
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:AEN06928.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_106_6

Not on your lists

6480..6707
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHW1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06927.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_106_7
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6745..7869)
DNA (1125bp) protein (375aa)
Ribonuclease R n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SUV6_NATMM
ribonuclease R
Ribonuclease R {ECO:0000313|EMBL:ELY29318.1}; Ribonuclease R winged-helix domain protein {ECO:0000313|EMBL:ADD05364.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
sw_4_scaffold_106_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8122..9135
DNA (1014bp) protein (338aa)
Arginase/agmatinase/formiminoglutamase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VC48_HALJB
Arginase/agmatinase/formiminoglutamase
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:ELY34601.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkal
sw_4_scaffold_106_9
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9566..10333
DNA (768bp) protein (256aa)
LamB/YcsF family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y1K8_9EURY
LamB/YcsF family protein
LamB/YcsF family protein {ECO:0000313|EMBL:AHG02328.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48
sw_4_scaffold_106_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10451..11827)
DNA (1377bp) protein (459aa)
Pyruvate carboxylase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIP6_9EURY
Carbamoyl phosphate synthase {ECO:0000313|EMBL:AHG02934.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL
carbamoyl-phosphate synthase L chain ATP-binding protein
sw_4_scaffold_106_11
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11974..12879
DNA (906bp) protein (302aa)
Allophanate hydrolase subunit 1 n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y3W5_9EURY
Allophanate hydrolase subunit 1 {ECO:0000313|EMBL:ELY67548.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 1
allophanate hydrolase subunit 1
sw_4_scaffold_106_12
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12876..13838
DNA (963bp) protein (321aa)
urea amidolyase-like protein (EC:6.3.4.6)
Urea amidolyase-like protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y0E8_9EURY
Urea amidolyase-like protein {ECO:0000313|EMBL:ELY67549.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 1047
sw_4_scaffold_106_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14005..14250
DNA (246bp) protein (82aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J625_HALJB
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ADJ13831.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" sour
sw_4_scaffold_106_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15055..16230)
DNA (1176bp) protein (392aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JVN0_9EURY
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGB37092.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" s
sw_4_scaffold_106_15
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16230..17321)
DNA (1092bp) protein (364aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Natronococcus occultus SP4 RepID=L0JYZ4_9EURY
phosphoglycerate dehydrogenase-like oxidoreductase
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGB37093.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natr
sw_4_scaffold_106_16
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17356..18114)
DNA (759bp) protein (253aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JY98_9EURY
carbohydrate ABC transporter membrane protein 2, CUT1 family
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AGB37094.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
sw_4_scaffold_106_17
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18111..19094)
DNA (984bp) protein (328aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JXR1_9EURY
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGB37095.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
sw_4_scaffold_106_18
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19141..20562)
DNA (1422bp) protein (474aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JWE2_9EURY
carbohydrate ABC transporter substrate-binding protein, CUT1 family
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:AGB37096.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcu
sw_4_scaffold_106_19
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20924..21577)
DNA (654bp) protein (218aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ILR2_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000313|EMBL:ELZ96399.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax su
4-hydroxythreonine-4-phosphate dehydrogenase
sw_4_scaffold_106_20
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21985..22881)
DNA (897bp) protein (299aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JVN0_9EURY
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGB37092.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" s
sw_4_scaffold_106_21
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23152..24003)
DNA (852bp) protein (284aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QU99_CHRSD
Sugar ABC transporter permease {ECO:0000313|EMBL:KFF48304.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
binding-protein-dependent transport system inner membrane protein
sw_4_scaffold_106_22
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23996..24967)
DNA (972bp) protein (324aa)
Permease component of ABC-type sugar transporter n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EF09_THECK
sugar ABC transporter permease
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AGA58853.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;"
sw_4_scaffold_106_23
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25051..26502)
DNA (1452bp) protein (484aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QUA1_CHRSD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFF48302.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
extracellular solute-binding protein
sw_4_scaffold_106_24
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26652..28202
DNA (1551bp) protein (517aa)
Carbohydrate kinase FGGY n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3HZ18_9RHIZ
Carbohydrate kinase FGGY {ECO:0000313|EMBL:EMG52902.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
carbohydrate kinase FGGY
sw_4_scaffold_106_25
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28291..28944
DNA (654bp) protein (218aa)
L-fuculose phosphate aldolase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AMG6_9EURY
L-fuculose phosphate aldolase {ECO:0000313|EMBL:ELY98563.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077
fuca; L-fuculose phosphate aldolase
sw_4_scaffold_106_26
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29112..30632
DNA (1521bp) protein (507aa)
Sugar kinase, FGGY family protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZZQ7_9EURY
Sugar kinase, FGGY family protein {ECO:0000313|EMBL:ELY91546.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DS
sugar kinase, FGGY family
sw_4_scaffold_106_27
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30700..32211
DNA (1512bp) protein (504aa)
Sugar kinase, FGGY family protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZZQ7_9EURY
Sugar kinase, FGGY family protein {ECO:0000313|EMBL:ELY91546.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DS
pentulose/hexulose kinase
sw_4_scaffold_106_28
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32414..33070
DNA (657bp) protein (219aa)
L-fuculose phosphate aldolase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AMG6_9EURY
L-fuculose phosphate aldolase {ECO:0000313|EMBL:ELY98563.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077
fuca; L-fuculose phosphate aldolase
sw_4_scaffold_106_29
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33236..34702)
DNA (1467bp) protein (489aa)
Xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=3 Tax=Haloferax RepID=M0F8I4_9EURY
Xylulose kinase {ECO:0000313|EMBL:ELZ67696.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
sw_4_scaffold_106_30
unknown

Not on your lists

comp(34707..35006)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying items 1-30 of 61 in total

View Taxonomy