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sw_4_scaffold_114

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_114_1
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..375
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NRU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA60313.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_4_scaffold_114_2
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(436..1062)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JEM1_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA01976.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
sw_4_scaffold_114_3
unknown

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comp(1193..1330)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_4_scaffold_114_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1502..2056)
DNA (555bp) protein (185aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Halogranum salarium B-1 RepID=J3JHT0_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EJN61246.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranu
methylase
sw_4_scaffold_114_5

Not on your lists

comp(2124..3353)
DNA (1230bp) protein (410aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPY2_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS10564.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sugar transporter
sw_4_scaffold_114_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3987..5588
DNA (1602bp) protein (534aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQ74_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EFW93138.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source
type I phosphodiesterase/nucleotide pyrophosphatase
sw_4_scaffold_114_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5585..6610
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23715.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
putative methicillin resistance protein
sw_4_scaffold_114_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7016..7972
DNA (957bp) protein (319aa)
ABC-type transport system ATP-binding/permease protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QU27_9EURY
ABC-type transport system ATP-binding/permease protein {ECO:0000313|EMBL:EFW92106.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
ABC-type transport system ATP-binding protein
sw_4_scaffold_114_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7969..8937
DNA (969bp) protein (323aa)
ABC-type transport system ATP-binding/permease protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QU27_9EURY
ABC-type transport system ATP-binding/permease protein {ECO:0000313|EMBL:EFW92106.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
ABC transporter
sw_4_scaffold_114_10
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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9321..10484
DNA (1164bp) protein (388aa)
FG-GAP repeat-containing protein Tax=RBG_13_Spirochaetes_68_11_curated
FG-GAP repeat protein id=1806262 bin=GWE2_Bacteroidetes_41_25 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
sw_4_scaffold_114_11

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comp(10960..11745)
DNA (786bp) protein (262aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XYE6_9ARCH
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ESS05276.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.
binding-protein-dependent transporters inner membrane component
sw_4_scaffold_114_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11745..12599)
DNA (855bp) protein (285aa)
binding-protein-dependent transporters inner membrane component id=24632667 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ERG94440.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
binding-protein-dependent transporters inner membrane component
sw_4_scaffold_114_13

Not on your lists

comp(12596..13495)
DNA (900bp) protein (300aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XSW7_9ARCH
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ESS05278.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
ssuB; putative sulfonate ABC transporter ATP-binding protein
sw_4_scaffold_114_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13488..14531)
DNA (1044bp) protein (348aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=24632665 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERG94438.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
sw_4_scaffold_114_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14972..15412
DNA (441bp) protein (147aa)
MarR family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAS4_HALJB
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:ADJ14796.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
sw_4_scaffold_114_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15492..15833
DNA (342bp) protein (114aa)
Major facilitator family multidrug efflux transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAS5_HALJB
major facilitator family multidrug efflux transporter
Major facilitator family multidrug efflux transporter {ECO:0000313|EMBL:ADJ14797.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" s
sw_4_scaffold_114_17
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16503..17162)
DNA (660bp) protein (220aa)
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1108 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflex
Superoxide dismutase n=1 Tax=Chloroflexus aurantiacus RepID=Q7X4G4_CHLAU
sw_4_scaffold_114_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17346..17903)
DNA (558bp) protein (186aa)
Transcriptional regulator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HG27_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ESP89670.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
DNA binding protein
sw_4_scaffold_114_19
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17992..18420)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B5P0_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ06120.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_4_scaffold_114_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19194..19994)
DNA (801bp) protein (267aa)
Transcriptional regulator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HG27_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ESP89670.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
transcriptional regulator-like protein
Displaying 20 items

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