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sw_4_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_132_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1151)
DNA (1149bp) protein (383aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IFW1_9EURY
Sugar transporter {ECO:0000313|EMBL:AHG03516.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
major facilitator superfamily protein
sw_4_scaffold_132_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1367..2095)
DNA (729bp) protein (243aa)
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GQY8_9EURY
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase {ECO:0000313|EMBL:ESP87466.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
sw_4_scaffold_132_3
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2245..3339)
DNA (1095bp) protein (365aa)
Oxidoreductase domain protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0II03_9EURY
Oxidoreductase domain protein {ECO:0000313|EMBL:ELZ96400.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATC
oxidoreductase domain protein
sw_4_scaffold_132_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3453..4586)
DNA (1134bp) protein (378aa)
Altronate dehydratase-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXJ6_9EURY
Altronate dehydratase-like protein {ECO:0000313|EMBL:ELZ27946.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
Altronate dehydratase-like protein
sw_4_scaffold_132_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4583..4906)
DNA (324bp) protein (108aa)
Altronate hydrolase n=2 Tax=Halarchaeum acidiphilum RepID=U2YFL7_9EURY
Altronate hydrolase {ECO:0000313|EMBL:GAD52846.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
garD; dehydratase
sw_4_scaffold_132_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4939..6144)
DNA (1206bp) protein (402aa)
Altronate dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN8_9EURY
Altronate dehydratase {ECO:0000313|EMBL:EMA48175.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
hypothetical protein
sw_4_scaffold_132_7
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6581..7351
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZH5_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ15482.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sa
IclR family transcriptional regulator
sw_4_scaffold_132_8
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7641..9341
DNA (1701bp) protein (567aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XN57_9EURY
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ELY63175.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;"
thiamine pyrophosphate protein domain protein TPP-binding protein
sw_4_scaffold_132_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9411..10337)
DNA (927bp) protein (309aa)
Dihydrodipicolinate synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8U6_9EURY
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EMA54311.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
dihydrodipicolinate synthetase
sw_4_scaffold_132_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10524..11345
DNA (822bp) protein (274aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J3JHA2_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EJN60814.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NAD-dependent epimerase/dehydratase
sw_4_scaffold_132_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11455..12237
DNA (783bp) protein (261aa)
HpcH/HpaI aldolase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG9_9EURY
Aldolase {ECO:0000313|EMBL:AHG02996.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_4_scaffold_132_12
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12301..13677
DNA (1377bp) protein (459aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI000312A213
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJF00520.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pand
sw_4_scaffold_132_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13674..14003
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AY74_AZOBR
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AIB15374.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
sw_4_scaffold_132_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14000..15733)
DNA (1734bp) protein (578aa)
Transporter, major facilitator family subfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB30_9EURY
Transporter, major facilitator family subfamily protein {ECO:0000313|EMBL:EMA54309.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
transporter, major facilitator family subfamily
sw_4_scaffold_132_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15787..16866
DNA (1080bp) protein (360aa)
Amidohydrolase 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFE5_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EMA56546.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
amidohydrolase 2
sw_4_scaffold_132_16
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16869..17234
DNA (366bp) protein (122aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP02_9EURY
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:ELY63287.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natr
Rieske (2Fe-2S) iron-sulfur domain protein
sw_4_scaffold_132_17
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17287..18753)
DNA (1467bp) protein (489aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit A n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1PZ28_9EURY
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ERG97781.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
glutamyl-tRNA amidotransferase subunit A
sw_4_scaffold_132_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18808..19860)
DNA (1053bp) protein (351aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXI8_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ27930.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
mandelate racemase/muconate lactonizing protein
sw_4_scaffold_132_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20069..20836)
DNA (768bp) protein (256aa)
Gluconolactonase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NP37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX07283.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
gnl; gluconolactonase
sw_4_scaffold_132_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20927..22000)
DNA (1074bp) protein (358aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58761.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_4_scaffold_132_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22115..22831)
DNA (717bp) protein (239aa)
2-hydroxyhepta-24-diene-1,7-dioate isomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2B5_HALJB
2-hydroxyhepta-24-diene-1,7-dioate isomerase
2-hydroxyhepta-24-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ADJ14872.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Ha
sw_4_scaffold_132_22
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22979..23779)
DNA (801bp) protein (267aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A2M0_9EURY
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ELY92102.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natria
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
sw_4_scaffold_132_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24004..24822)
DNA (819bp) protein (273aa)
Aldo/keto reductase n=2 Tax=Halococcus hamelinensis RepID=M0LVM3_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA37213.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
aldo/keto reductase
sw_4_scaffold_132_24
unknown

Not on your lists

comp(24895..24999)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_4_scaffold_132_25
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25244..26035
DNA (792bp) protein (264aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELY69896.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELY69896.1};; Uncharacterized protein {ECO:0000313|EMBL:AFZ72956.1}; TaxID=797304 species="Arc
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGK6_NATGS
dehydrogenase
sw_4_scaffold_132_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26138..27679)
DNA (1542bp) protein (514aa)
ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1B5_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ27939.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
TonB-dependent receptor plug
sw_4_scaffold_132_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27810..29129)
DNA (1320bp) protein (440aa)
SAF domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCD5_9EURY
SAF domain-containing protein {ECO:0000313|EMBL:EMA54764.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
dihydrodipicolinate reductase
sw_4_scaffold_132_28

Not on your lists

comp(29258..30361)
DNA (1104bp) protein (368aa)
Malate/L-lactate dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YLY5_9ARCH
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS12602.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_4_scaffold_132_29
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30395..31888)
DNA (1494bp) protein (498aa)
Amidase {ECO:0000313|EMBL:ELY51498.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ELY51498.1};; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Nat
Amidase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WT68_9EURY
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
sw_4_scaffold_132_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32096..32872
DNA (777bp) protein (259aa)
Oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF87_9EURY
Oxidoreductase-like protein {ECO:0000313|EMBL:EMA54253.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
inb; oxidoreductase-like
Displaying items 1-30 of 54 in total

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