ggKbase home page

sw_4_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_138_1
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
Siroheme synthase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ABU6_NATGS
siroheme synthase
Siroheme synthase {ECO:0000313|EMBL:ELY66891.1}; Siroheme synthase, N-terminal domain protein {ECO:0000313|EMBL:AFZ71368.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; N
sw_4_scaffold_138_2
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(491..1300)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Geobacillus sp. (strain C56-T3) RepID=D7D5E9_GEOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ05570.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
sw_4_scaffold_138_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1354..1980)
DNA (627bp) protein (209aa)
hypothetical protein; K09967 hypothetical protein id=24616663 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87440.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_4_scaffold_138_4
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2117..3724
DNA (1608bp) protein (536aa)
FAD dependent oxidoreductase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JMZ2_NATP1
glycine/D-amino acid oxidase, deaminating
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELY77886.1}; Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGB31947.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrial
sw_4_scaffold_138_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3887..4567
DNA (681bp) protein (227aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSG7_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW92376.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
bacterio-opsin activator HTH domain-containing protein
sw_4_scaffold_138_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4809..5630
DNA (822bp) protein (274aa)
Hydrolase or acyltransferase of alpha/beta superfamily protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLM1_HALBP
hydrolase or acyltransferase of alpha/beta superfamily
Hydrolase or acyltransferase of alpha/beta superfamily protein {ECO:0000313|EMBL:ELY29558.1}; Predicted hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:ADQ67224.1}; TaxID=4693
sw_4_scaffold_138_7
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5636..7045
DNA (1410bp) protein (470aa)
Trk active potasium channel n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KEZ1_HALAR
Trk active potasium channel {ECO:0000313|EMBL:EMA19902.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensi
metal transporter
sw_4_scaffold_138_8
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7032..7202
DNA (171bp) protein (57aa)
Kef-type potassium channel protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0QT77_9EURY
Kef-type potassium channel protein {ECO:0000313|EMBL:ELZ82907.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JC
TrkA-N domain protein
sw_4_scaffold_138_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7640..9292
DNA (1653bp) protein (551aa)
hypothetical protein id=24616114 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Flagella integral membrane protein {ECO:0000313|EMBL:ESP87941.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
hypothetical protein
sw_4_scaffold_138_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9425..9619)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJT9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44715.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_4_scaffold_138_11
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9758..10267)
DNA (510bp) protein (170aa)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WVY2_9EURY
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Na
aspartate carbamoyltransferase, regulatory subunit
sw_4_scaffold_138_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10264..11280)
DNA (1017bp) protein (339aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1227456 species="Ar
Aspartate carbamoyltransferase n=3 Tax=Haloarcula RepID=G0HU14_HALHT
aspartate carbamoyltransferase catalytic subunit
sw_4_scaffold_138_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11413..12039
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPU9_NATPD
KaiC-like transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CAI49849.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_138_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12101..12628
DNA (528bp) protein (176aa)
A-G-specific adenine glycosylase protein {ECO:0000313|EMBL:ERJ07007.1}; EC=3.2.2.- {ECO:0000313|EMBL:ERJ07007.1};; NUDIX hydrolase family protein {ECO:0000313|EMBL:CCQ34777.1}; TaxID=1033806 species="
A-G-specific adenine glycosylase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKD7_9EURY
NUDIX hydrolase family protein
sw_4_scaffold_138_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12829..13224
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MR34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48066.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_138_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13229..13678
DNA (450bp) protein (150aa)
Nucleotide-binding protein, PIN domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUE8_9EURY
Nucleotide-binding protein, PIN domain-containing protein {ECO:0000313|EMBL:EMA48065.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
sw_4_scaffold_138_17
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13758..14837)
DNA (1080bp) protein (360aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2L5_HALJB
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
sw_4_scaffold_138_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15054..15809)
DNA (756bp) protein (252aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EV86_9EURY
trehalose-phosphatase
sw_4_scaffold_138_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16316..17323)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXD7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36775.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_4_scaffold_138_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17614..18996
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N239_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51992.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_138_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19192..20655
DNA (1464bp) protein (488aa)
Permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSD6_HALMO
Permease {ECO:0000313|EMBL:EMA47659.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
permease
sw_4_scaffold_138_22
Nocardioides sp. JS1661, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20865..22532
DNA (1668bp) protein (556aa)
Amine oxidase (Flavin-containing) n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GIN5_9CORY
Phytoene dehydrogenase {ECO:0000313|EMBL:AIQ77710.1}; TaxID=1517491 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. JS1661.;"
oxidoreductase
sw_4_scaffold_138_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22664..23632
DNA (969bp) protein (323aa)
Zn-dependent oxidoreductase, NADph:quinone reductase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2L2_9EURY
Zn-dependent oxidoreductase, NADph:quinone reductase {ECO:0000313|EMBL:EMA52182.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
NADPH:quinone reductase
sw_4_scaffold_138_24
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(23721..24248)
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=2240926 bin=GWB2_Chloroflexi_54_36 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=BJP_08E140C01_Anaerolineales_40_8
sw_4_scaffold_138_25
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24379..25077)
DNA (699bp) protein (233aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_02131}; Short=HPPK {ECO:0000256|HAMAP-Rule:MF_02131};; EC=2.7.6.3 {ECO:0000256|HAMAP-Rule:MF_02131};; 2-amino-4-hydroxy-6
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VMS8_9EURY
hypothetical protein
sw_4_scaffold_138_26
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25099..26340)
DNA (1242bp) protein (414aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000313|EMBL:ACM56975.1}; EC=2.5.1.15 {ECO:0000313|EMBL:ACM56975.1};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
dihydropteroate synthase n=1 Tax=Halorubrum sp. T3 RepID=UPI0003647E82
sw_4_scaffold_138_27
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26471..27751)
DNA (1281bp) protein (427aa)
Amidohydrolase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GPR0_HALVD
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ELY36946.1}; Amidohydrolase subfamily {ECO:0000313|EMBL:ADE01595.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofer
sw_4_scaffold_138_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27910..28881
DNA (972bp) protein (324aa)
Phosphoglycerate dehydrogenase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QVI0_9EURY
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EFW91502.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
2-hydroxyacid dehydrogenase
sw_4_scaffold_138_29
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29093..29641
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D658_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35393.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_4_scaffold_138_30
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29690..30979
DNA (1290bp) protein (430aa)
hypothetical protein id=24622696 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH01113.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy