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sw_4_scaffold_140

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_140_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..1065
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY12_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50607.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_140_2
unknown

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comp(1172..1819)
DNA (648bp) protein (216aa)

This feature has no annotations

sw_4_scaffold_140_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2205..3542)
DNA (1338bp) protein (446aa)
hmgB, mvaB; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:CCQ35818.1}; EC=2.3.3.10 {ECO:0000313|EMBL:CCQ35818.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPA8_NATM8
sw_4_scaffold_140_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3645..5906)
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P430_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47852.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_4_scaffold_140_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6022..8259)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P430_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47852.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_4_scaffold_140_6
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8420..9004)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=I7BU41_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY83291.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_4_scaffold_140_7
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9074..9901)
DNA (828bp) protein (276aa)
TatD-related deoxyribonuclease n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MAQ4_9EURY
TatD-related deoxyribonuclease {ECO:0000313|EMBL:EMA41709.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireduce
putative metal-dependent hydrolase
sw_4_scaffold_140_8
unknown

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comp(9843..10421)
DNA (579bp) protein (193aa)

This feature has no annotations

sw_4_scaffold_140_9
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10476..10976)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=Q9HPJ5_HALSA
Uncharacterized protein {ECO:0000313|EMBL:KDE59571.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_4_scaffold_140_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11145..12890
DNA (1746bp) protein (582aa)
Na+ antiporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4U2_9EURY
Na+ antiporter {ECO:0000313|EMBL:EMA52901.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;
na+ antiporter
sw_4_scaffold_140_11
unknown

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comp(12717..13058)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_4_scaffold_140_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13167..14150)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXI8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49544.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_140_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14147..17326)
DNA (3180bp) protein (1060aa)
Transmembrane oligosaccharyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ08_9EURY
Transmembrane oligosaccharyl transferase {ECO:0000313|EMBL:EMA44719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
tot; transmembrane oligosaccharyl transferase
sw_4_scaffold_140_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17446..18414
DNA (969bp) protein (323aa)
Succinoglycan biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKY9_9EURY
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:EMA45095.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
family 2 glycosyl transferase
sw_4_scaffold_140_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18419..19519
DNA (1101bp) protein (367aa)
Group 1 glycosyl transferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MUZ5_9EURY
Group 1 glycosyl transferase {ECO:0000313|EMBL:EMA49547.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
group 1 glycosyl transferase
sw_4_scaffold_140_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19573..21129
DNA (1557bp) protein (519aa)
Polysaccharide biosynthesis protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J598_HALJB
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADJ13679.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
sw_4_scaffold_140_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21248..22363
DNA (1116bp) protein (372aa)
Family 2 glycosyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKZ8_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:EMA45105.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
family 2 glycosyl transferase
sw_4_scaffold_140_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22360..22686)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N796_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52525.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_140_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22925..23134
DNA (210bp) protein (70aa)
Putative CopG family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4N4_HALJB
putative CopG family transcriptional regulator
Putative CopG family transcriptional regulator {ECO:0000313|EMBL:ELY36090.1}; Putative transcriptional regulator, CopG family protein {ECO:0000313|EMBL:ADJ15501.1}; TaxID=795797 species="Archaea; Eury
sw_4_scaffold_140_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23715..24101)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46296.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 20 items

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