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sw_4_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_156_1
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..794)
DNA (792bp) protein (264aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X9B3_9EURY
Cysteine synthase {ECO:0000313|EMBL:ELY58001.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524
sw_4_scaffold_156_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

987..2093
DNA (1107bp) protein (369aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3U3_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA40482.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
ABC transporter, ATP-binding protein
sw_4_scaffold_156_3
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2114..2869
DNA (756bp) protein (252aa)
ABC-2 type transporter n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A4P3_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:ELY92323.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.
ABC-type polysaccharide/polyol phosphate export systems, permease component
sw_4_scaffold_156_4
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2967..3356
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ISH2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ98763.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_4_scaffold_156_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3435..5711)
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2R4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51818.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_156_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5759..6067)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49647.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_156_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6191..7486
DNA (1296bp) protein (432aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Natronococcus occultus SP4 RepID=L0JYI7_9EURY
sw_4_scaffold_156_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7632..8237
DNA (606bp) protein (202aa)
Galactoside O-acetyltransferase 3 n=1 Tax=Halogranum salarium B-1 RepID=J3EZL9_9EURY
Galactoside O-acetyltransferase 3 {ECO:0000313|EMBL:EJN61082.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
transferase
sw_4_scaffold_156_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8311..8583)
DNA (273bp) protein (91aa)
Potassium channel-like protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0QT94_9EURY
Potassium channel-like protein {ECO:0000313|EMBL:EMA20211.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
pch2; potassium channel-like
sw_4_scaffold_156_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8607..9638)
DNA (1032bp) protein (344aa)
Potassium channel protein {ECO:0000313|EMBL:ERJ06898.1}; EC=3.6.1.22 {ECO:0000313|EMBL:ERJ06898.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
Potassium channel-like protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CYU4_9EURY
potassium channel-like protein
sw_4_scaffold_156_11
unknown

Not on your lists

10415..10624
DNA (210bp) protein (70aa)

This feature has no annotations

sw_4_scaffold_156_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10705..10974)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3C1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15228.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_4_scaffold_156_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11108..11941)
DNA (834bp) protein (278aa)
Htr-like protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E4Y7_9EURY
HTR-like protein
Htr-like protein {ECO:0000313|EMBL:ERJ07298.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
sw_4_scaffold_156_14
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12056..13057)
DNA (1002bp) protein (334aa)
Beta-ribofuranosylaminobenzene 5'-phosphate synthase family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQJ5_HALLT
beta-ribofuranosylaminobenzene 5'-phosphate synthase family
Beta-ribofuranosylaminobenzene 5'-phosphate synthase family {ECO:0000313|EMBL:ACM57616.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
sw_4_scaffold_156_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13183..14361)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6L9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_156_16
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14615..15166
DNA (552bp) protein (184aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000313|EMBL:ELZ61199.1}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000313|EMBL:E
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FRK6_9EURY
sw_4_scaffold_156_17
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15150..16238
DNA (1089bp) protein (363aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=694430 species="Archaea; Euryarchaeota;
dihydroxy-acid dehydratase n=1 Tax=Halarchaeum acidiphilum RepID=UPI000372E297
dihydroxy-acid dehydratase
sw_4_scaffold_156_18
unknown

Not on your lists

comp(16486..16746)
DNA (261bp) protein (87aa)

This feature has no annotations

sw_4_scaffold_156_19
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16844..17521)
DNA (678bp) protein (226aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWW2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW90765.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_4_scaffold_156_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17647..18396
DNA (750bp) protein (250aa)
hypothetical protein id=24646583 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10755.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_4_scaffold_156_trna_1
unknown

Not on your lists

comp(18801..18873)
DNA (73bp)
transferRNA
sw_4_scaffold_156_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19198..19983
DNA (786bp) protein (262aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1I9_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA51736.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
mscS; mechanosensitive ion channel
sw_4_scaffold_156_22
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20078..21154)
DNA (1077bp) protein (359aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BDV3_9EURY
rRNA pseudouridine synthase, putative
sw_4_scaffold_156_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21229..21804)
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk2; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
sw_4_scaffold_156_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21927..22877)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_156_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22996..23646)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU3_9EURY
sw_4_scaffold_156_26
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23881..24900
DNA (1020bp) protein (340aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR1_9EURY
sw_4_scaffold_156_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25086..26744
DNA (1659bp) protein (553aa)
Putative signal-transducing histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4K2_9EURY
Putative signal-transducing histidine kinase {ECO:0000313|EMBL:ELZ29607.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
hypothetical protein
sw_4_scaffold_156_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26881..27585)
DNA (705bp) protein (235aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI2_9EURY
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EFW93465.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalop
sw_4_scaffold_156_29
unknown

Not on your lists

27671..28378
DNA (708bp) protein (236aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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