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sw_4_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_245_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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188..640
DNA (453bp) protein (151aa)
HTH/CBS domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPX4_NATPD
CBS domain-containing protein
HTH/CBS domain protein {ECO:0000313|EMBL:CAI49824.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_4_scaffold_245_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(757..1677)
DNA (921bp) protein (307aa)
Carotene biosynthesis associated membrane protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAF9_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:EMA41380.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
carotene biosynthesis associated membrane protein
sw_4_scaffold_245_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1670..2566)
DNA (897bp) protein (299aa)
Prenyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ38_9EURY
Prenyltransferase {ECO:0000313|EMBL:EMA44450.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
UbiA prenyltransferase
sw_4_scaffold_245_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2572..4191)
DNA (1620bp) protein (540aa)
crtI_1; phytoene dehydrogenase 1 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase 1 (Phytoene desaturase) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4C9_9EURY
Phytoene dehydrogenase 1 (Phytoene desaturase) {ECO:0000313|EMBL:EMA52010.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
sw_4_scaffold_245_5
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4457..5971
DNA (1515bp) protein (505aa)
MATE efflux family protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3C0_9EURY
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ADB60821.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (st
sw_4_scaffold_245_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6185..7516
DNA (1332bp) protein (444aa)
lignostilbene-alpha,beta-dioxygenase (EC:1.13.11.-)
Lignostilbene-alpha,beta-dioxygenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5K7_9EURY
Lignostilbene-alpha,beta-dioxygenase {ECO:0000313|EMBL:EMA51965.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
sw_4_scaffold_245_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7723..8037
DNA (315bp) protein (105aa)
Nucleotide pyrophosphohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH6_9EURY
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EMA49338.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
putative pyrophosphatase
sw_4_scaffold_245_8

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comp(8129..8812)
DNA (684bp) protein (228aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XVF9_9ARCH
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:ESS06168.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
thiamine pyrophosphate protein domain protein TPP-binding protein
sw_4_scaffold_245_9

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comp(8802..9290)
DNA (489bp) protein (163aa)
Putative thiamine-pyrophosphate-binding protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDX3_9ARCH
Putative thiamine-pyrophosphate-binding protein {ECO:0000313|EMBL:ESS06169.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
putative sulfopyruvate decarboxylase subunit alpha
sw_4_scaffold_245_10
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9263..10705)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLM5_9EURY
amidase
Amidase {ECO:0000313|EMBL:ADD07407.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 / DSM 3394 / N
sw_4_scaffold_245_11

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comp(10867..11400)
DNA (534bp) protein (178aa)
UspA domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MG46_9ARCH
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEN05940.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_245_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11533..12033
DNA (501bp) protein (167aa)
UspA domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWF2_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EMA50047.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
UspA domain-containing protein
sw_4_scaffold_245_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12739..14214
DNA (1476bp) protein (492aa)
mmsA; methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] id=24615488 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ESP87032.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
mmsA; methylmalonate-semialdehyde dehydrogenase
sw_4_scaffold_245_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14408..15817
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP00_9EURY
livH; ABC-type branched-chain amino acid transport system, permease I
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERG92736.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
sw_4_scaffold_245_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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15825..17633
DNA (1809bp) protein (603aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LJM9_HALWC
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCC40963.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
sw_4_scaffold_245_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17630..18601
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SW79_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG92734.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_4_scaffold_245_17
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18974..20467
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZ03_9EURY
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ERG95021.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
livJ3; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_4_scaffold_245_18
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20651..21361
DNA (711bp) protein (237aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JRZ3_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10430.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_4_scaffold_245_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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21525..22688
DNA (1164bp) protein (388aa)
FAD dependent oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JI68_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJN61591.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glycine/D-amino acid oxidase, deaminating
sw_4_scaffold_245_20
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(22795..23271)
DNA (477bp) protein (159aa)
GCN5-related N-acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IB93_9EURY
Protein N-acetyltransferase {ECO:0000313|EMBL:AHG02657.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1
acetyltransferase (GNAT) family protein
sw_4_scaffold_245_21
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(23268..23624)
DNA (357bp) protein (119aa)
UspA domain-containing protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I4Z8_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:ELZ90459.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
uspA14; UspA domain-containing protein
sw_4_scaffold_245_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23658..24512
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD19_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43248.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_245_23
unknown

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24631..24783
DNA (153bp) protein (51aa)

This feature has no annotations

sw_4_scaffold_245_24
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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24776..25750
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PQC8_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AFY34989.1}; Flags: Precursor;; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
hypothetical protein
sw_4_scaffold_245_25
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25702..26355
DNA (654bp) protein (218aa)
beta-lactamase n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI000302F87C
Beta-lactamase
Penicillin-binding protein E {ECO:0000313|EMBL:ERH96750.1}; TaxID=1324966 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringie
sw_4_scaffold_245_26
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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27288..27824
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L4F3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA28457.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
sw_4_scaffold_245_27
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(27990..28475)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PN66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA70250.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_4_scaffold_245_28
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(28590..28940)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NW72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61489.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_4_scaffold_245_29
unknown

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29559..29960
DNA (402bp) protein (134aa)

This feature has no annotations

sw_4_scaffold_245_30
unknown

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comp(30140..30262)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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