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sw_4_scaffold_265

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_265_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..207)
DNA (207bp) protein (69aa)
Site-specific recombinase XerD n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRU2_HALBP
site-specific recombinase xerd
Site-specific recombinase XerD {ECO:0000313|EMBL:ADQ66879.1}; Site-specific recombinase xerd {ECO:0000313|EMBL:ELY30386.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
sw_4_scaffold_265_trna_1
unknown

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comp(358..430)
DNA (73bp)
transferRNA
sw_4_scaffold_265_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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674..1300
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P252_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10745.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_4_scaffold_265_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1431..2159
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27619.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_265_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2495..4015
DNA (1521bp) protein (507aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC1_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ27618.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
OB-fold tRNA/helicase-type nucleic acid binding-protein
sw_4_scaffold_265_5
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4244..4702
DNA (459bp) protein (153aa)
Transcription factor CBF/NF-Y/histone domain protein n=5 Tax=Halorubrum RepID=M0D944_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ45146.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
transcription factor CBF/NF-Y/histone domain protein
sw_4_scaffold_265_6
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4699..5838
DNA (1140bp) protein (380aa)
Histone deacetylase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GU11_9EURY
Histone deacetylase {ECO:0000313|EMBL:ELZ75002.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
acuC; histone deacetylase
sw_4_scaffold_265_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5817..7184)
DNA (1368bp) protein (456aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB7_9EURY
sw_4_scaffold_265_8
unknown

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comp(7291..7566)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_4_scaffold_265_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7719..9059
DNA (1341bp) protein (447aa)
5'-nucleotidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DKX7_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ELZ34814.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
5'-nucleotidase
sw_4_scaffold_265_10
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9203..9610
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0H418_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78508.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_4_scaffold_265_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9679..10914)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
sw_4_scaffold_265_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11120..11995
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49351.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_265_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12069..12800)
DNA (732bp) protein (244aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMZ8_9EURY
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EMA46114.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_4_scaffold_265_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12947..14080)
DNA (1134bp) protein (378aa)
TrkA-N domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND20_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:EMA55756.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
sodium/proton antiporter, cpa1 family
sw_4_scaffold_265_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14098..14544)
DNA (447bp) protein (149aa)
TrkA-N domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND20_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:EMA55756.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
kefC; potassium transport protein kefC
Displaying 16 items

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