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sw_4_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_27_1
unknown

Not on your lists

241..333
DNA (93bp) protein (31aa)

This feature has no annotations

sw_4_scaffold_27_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

382..1146
DNA (765bp) protein (255aa)
Cationic amino acid transporter n=2 Tax=Halococcus hamelinensis RepID=M0LWT9_9EURY
Cationic amino acid transporter {ECO:0000313|EMBL:EMA37936.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
sw_4_scaffold_27_3
unknown

Not on your lists

comp(1427..1555)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_4_scaffold_27_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1685..1954
DNA (270bp) protein (90aa)
Universal stress protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCH4_9EURY
Universal stress protein {ECO:0000313|EMBL:ELZ32447.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
UspA domain-containing protein
sw_4_scaffold_27_5
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1951..2571
DNA (621bp) protein (207aa)
Amino acid transporter n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HGE1_9EURY
Amino acid transporter {ECO:0000313|EMBL:ELZ82144.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
cat2; cationic amino acid transporter
sw_4_scaffold_27_6
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2843..3271
DNA (429bp) protein (143aa)
Amino acid transporter n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HGE1_9EURY
Amino acid transporter {ECO:0000313|EMBL:ELZ82144.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
amino acid transporter
sw_4_scaffold_27_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3273..3464
DNA (192bp) protein (64aa)
Amino acid permease-associated protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JGZ5_HALVA
Amino acid permease-associated protein {ECO:0000313|EMBL:EMA07618.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula va
amino acid permease
sw_4_scaffold_27_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3639..4151
DNA (513bp) protein (171aa)
Amino acid permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9K2_9EURY
Amino acid permease {ECO:0000313|EMBL:EMA42431.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
amino acid permease-associated protein
sw_4_scaffold_27_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4165..4623)
DNA (459bp) protein (153aa)
Amino acid permease-associated region n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZR8_9EURY
Amino acid permease-associated region {ECO:0000313|EMBL:EFW89812.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
sw_4_scaffold_27_10
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4844..5176)
DNA (333bp) protein (111aa)
UspA domain protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KDV4_HALAR
UspA domain protein {ECO:0000313|EMBL:EMA17995.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
universal stress protein UspA-like protein
sw_4_scaffold_27_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5625..7307
DNA (1683bp) protein (561aa)
Histone acetyltransferase, ELP3 family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQN8_9EURY
Histone acetyltransferase, ELP3 family protein {ECO:0000313|EMBL:EFW93302.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hal
histone acetyltransferase, ELP3 family protein
sw_4_scaffold_27_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7608..7850
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6R5_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ33334.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_4_scaffold_27_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8015..8797)
DNA (783bp) protein (261aa)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Halogranum salarium B-1 RepID=J2ZZS3_9EURY
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EJN58548.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-
histidinol phosphate phosphatase HisJ family
sw_4_scaffold_27_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8971..9561)
DNA (591bp) protein (197aa)
50S ribosomal protein L15e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5M9_9EURY
50S ribosomal protein L15e {ECO:0000256|HAMAP-Rule:MF_00256}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
rpl15e; 50S ribosomal protein L15e
sw_4_scaffold_27_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9904..10602
DNA (699bp) protein (233aa)
Threonine/homoserine/homoserine lactone efflux protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBJ1_HALJB
threonine/homoserine/homoserine lactone efflux protein
Threonine/homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:ADJ16644.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;"
sw_4_scaffold_27_16

Not on your lists

comp(10690..11334)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJ14_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05246.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_27_17
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11488..16224)
DNA (4737bp) protein (1579aa)
DNA helicase id=24615754 bin=Halobonum_tyrrellensis species=Halorubrum lipolyticum genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA helicase-like protein {ECO:0000313|EMBL:ELZ20982.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 138
DNA helicase
sw_4_scaffold_27_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16361..17152
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLC8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46188.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_27_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17252..18079)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3N0_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47702.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_4_scaffold_27_20
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18264..18392
DNA (129bp) protein (43aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY43129.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
sw_4_scaffold_27_21

Not on your lists

18494..19660
DNA (1167bp) protein (389aa)
acaB3; acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y6E1_9ARCH
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ESS10423.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_4_scaffold_27_22
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19662..20240
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W8Z8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45919.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
sw_4_scaffold_27_23
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20307..21221)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1D4_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB63181.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_4_scaffold_27_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21300..23303)
DNA (2004bp) protein (668aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4V1_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA40842.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
acyl-CoA synthetase
sw_4_scaffold_27_25
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23390..23836)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JG66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59826.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_4_scaffold_27_26
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24019..25290
DNA (1272bp) protein (424aa)
Sodium/hydrogen exchanger n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B3U2_NATA1
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ELZ05465.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 70
hypothetical protein
sw_4_scaffold_27_27
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25408..26481
DNA (1074bp) protein (358aa)
Cation transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3P4_HALJB
cation transporter
Cation transporter {ECO:0000313|EMBL:ADJ15351.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (st
sw_4_scaffold_27_28
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26490..26960
DNA (471bp) protein (157aa)
Potassium transport system protein trkH1 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L563_HALJP
Potassium transport system protein trkH1 {ECO:0000313|EMBL:EMA28248.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
trkH1; potassium transport system protein trkH1
sw_4_scaffold_27_29
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27140..27808
DNA (669bp) protein (223aa)
DNA binding domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7H4_HALJB
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AHF99701.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_4_scaffold_27_30
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28049..29077
DNA (1029bp) protein (343aa)
Transcription initiation factor IIB n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W004_9EURY
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Displaying items 1-30 of 44 in total

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