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sw_4_scaffold_274

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_274_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..611
DNA (609bp) protein (203aa)
IMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00705}; EC=3.5.4.10 {ECO:0000256|HAMAP-Rule:MF_00705};; IMP synthase {ECO:0000256|HAMAP-Rule:MF_00705}; Inosinicase {ECO:0000256|HAMAP-Rule:MF_00705}; Tax
IMP cyclohydrolase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF13_HALMO
IMP cyclohydrolase
sw_4_scaffold_274_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

725..1405
DNA (681bp) protein (227aa)
Serine/threonine protein phosphatase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MEY7_HALMO
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EMA44312.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morr
phosphodiesterase
sw_4_scaffold_274_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1469..2647)
DNA (1179bp) protein (393aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M575_9EURY
sw_4_scaffold_274_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2978..3385
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42686.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_274_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3479..4108)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55048.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_274_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4271..4426
DNA (156bp) protein (52aa)
Small CPxCG-related zinc finger protein n=2 Tax=Halococcus RepID=M0MS26_9EURY
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:EMA52685.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
hypothetical protein
sw_4_scaffold_274_7
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5180..6328
DNA (1149bp) protein (383aa)
ABC transporter substrate-binding protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GZP4_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ76977.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lars
ThiB subfamily ABC transporter periplasmic binding protein
sw_4_scaffold_274_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6485..8356
DNA (1872bp) protein (624aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP59_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ23664.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
sw_4_scaffold_274_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8358..9527
DNA (1170bp) protein (390aa)
ABC transporter n=1 Tax=Halogranum salarium B-1 RepID=J3A3H7_9EURY
ABC transporter {ECO:0000313|EMBL:EJN59943.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
sw_4_scaffold_274_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9626..10306)
DNA (681bp) protein (227aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M593_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:EMA40977.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
sw_4_scaffold_274_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10832..11140
DNA (309bp) protein (103aa)
Conserved hypothetical membrane protein (DUF2391) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPZ1_9EURY
conserved hypothetical membrane protein (DUF2391)
Conserved hypothetical membrane protein (DUF2391) {ECO:0000313|EMBL:CCQ34114.1}; Putative integral membrane protein {ECO:0000313|EMBL:ERJ07337.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Haloba
sw_4_scaffold_274_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11242..11820
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_274_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11975..12766)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG40_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44323.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_274_14
unknown

Not on your lists

comp(12766..12855)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_4_scaffold_274_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12960..14465)
DNA (1506bp) protein (502aa)
MATE efflux family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICL6_9EURY
MATE efflux family protein
Multidrug transporter MatE {ECO:0000313|EMBL:AHG05065.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.
sw_4_scaffold_274_16
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14626..15747)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XVW7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY65551.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
sw_4_scaffold_274_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15752..16180)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42693.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_274_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16184..16816)
DNA (633bp) protein (211aa)
GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA72_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA42692.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
small GTP-binding protein domain
sw_4_scaffold_274_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17696..19510
DNA (1815bp) protein (605aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1F2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
sw_4_scaffold_274_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19707..20486
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2X8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39758.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
sw_4_scaffold_274_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20711..21427)
DNA (717bp) protein (239aa)
Signal peptidase I-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NI91_9EURY
Signal peptidase I-like protein {ECO:0000313|EMBL:EMA56824.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailand
sec11a; signal sequence peptidase
sw_4_scaffold_274_22
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21527..22876
DNA (1350bp) protein (450aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325, ECO:0000313|EMBL:ELY59544.1}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325, ECO:000031
DNA polymerase ii small subunit (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XCX3_9EURY
Displaying 22 items

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