ggKbase home page

sw_4_scaffold_284

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_284_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..311
DNA (309bp) protein (103aa)
tRNA splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1033806 species="Archaea
tRNA-splicing endonuclease n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PK06_9EURY
sw_4_scaffold_284_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(355..1029)
DNA (675bp) protein (225aa)
trans-aconitate 2-methyltransferase id=24646648 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10817.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
trans-aconitate 2-methyltransferase
sw_4_scaffold_284_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1076..2242)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_284_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2739..4457
DNA (1719bp) protein (573aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1227456 species="Archaea
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWB5_9EURY
sw_4_scaffold_284_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4782..6293
DNA (1512bp) protein (504aa)
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:ESP87957.1}; EC=6.1.1.20 {ECO:0000313|EMBL:ESP87957.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Phenylalanyl-tRNA ligase subunit alpha n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXR9_9EURY
phenylalanyl-tRNA synthetase, alpha subunit
sw_4_scaffold_284_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6293..8134
DNA (1842bp) protein (614aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N037_9EURY
sw_4_scaffold_284_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8285..8656)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KN39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA22802.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_4_scaffold_284_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8872..9849
DNA (978bp) protein (326aa)
ddh; 2-D-hydroxyacid dehydrogenase (EC:1.1.1.-)
2-D-hydroxyacid dehydrogenase {ECO:0000313|EMBL:CCQ36284.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCQ36284.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
2-D-hydroxyacid dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1C8_NATM8
sw_4_scaffold_284_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10030..11061
DNA (1032bp) protein (344aa)
Membrane protein n=1 Tax=Halogranum salarium B-1 RepID=J3JET9_9EURY
Membrane protein {ECO:0000313|EMBL:EJN58656.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ribonuclease BN-like protein
sw_4_scaffold_284_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11115..12368
DNA (1254bp) protein (418aa)
TrkA-C domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBV2_9EURY
TrkA-C domain-containing protein {ECO:0000313|EMBL:EMA54150.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailan
TrkA-C domain-containing protein
sw_4_scaffold_284_11
unknown

Not on your lists

comp(12810..13574)
DNA (765bp) protein (255aa)

This feature has no annotations

sw_4_scaffold_284_12
unknown

Not on your lists

comp(13644..14207)
DNA (564bp) protein (188aa)

This feature has no annotations

sw_4_scaffold_284_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14419..14994
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LX71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36705.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_4_scaffold_284_14
unknown

Not on your lists

14946..15107
DNA (162bp) protein (54aa)

This feature has no annotations

sw_4_scaffold_284_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15212..16483)
DNA (1272bp) protein (424aa)
Phosphate ABC transporter permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTF6_HALMO
Phosphate ABC transporter permease {ECO:0000313|EMBL:EMA48014.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhu
pstA2; phosphate ABC transporter permease
sw_4_scaffold_284_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16480..17556)
DNA (1077bp) protein (359aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQN7_9EURY
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:EMA35801.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
phosphate ABC transporter, inner membrane subunit PstC
sw_4_scaffold_284_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17600..18607)
DNA (1008bp) protein (336aa)
Phosphate ABC transporter substrate-binding protein, phot family n=2 Tax=Halococcus RepID=M0NGI9_9EURY
Phosphate ABC transporter substrate-binding protein, phot family {ECO:0000313|EMBL:EMA56668.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
phosphate ABC transporter substrate-binding protein, phot family
sw_4_scaffold_284_18
unknown

Not on your lists

19187..19261
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 18 items

View Taxonomy