ggKbase home page

sw_4_scaffold_305

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_305_trna_1
unknown

Not on your lists

comp(12..96)
DNA (85bp)
transferRNA
sw_4_scaffold_305_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(199..1194)
DNA (996bp) protein (332aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZLG2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61590.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_4_scaffold_305_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1351..2514
DNA (1164bp) protein (388aa)
FAD dependent oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JI68_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJN61591.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
FAD dependent oxidoreductase
sw_4_scaffold_305_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2639..3043
DNA (405bp) protein (135aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJA3_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA45438.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
acyl-CoA dehydrogenase domain protein
sw_4_scaffold_305_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3040..3822
DNA (783bp) protein (261aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C739_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ17754.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.
sw_4_scaffold_305_5
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3845..4186)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=L9V4Z9_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CQR52490.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_4_scaffold_305_6
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4183..4554)
DNA (372bp) protein (124aa)
Transcription regulator n=3 Tax=Haloferax RepID=M0FGM1_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ59060.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
transcription regulator
sw_4_scaffold_305_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4609..5256
DNA (648bp) protein (216aa)
Phosphoglycolate phosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML27_9EURY
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EMA45439.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_4_scaffold_305_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5223..5708)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LLP8_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40854.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_4_scaffold_305_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5981..6268
DNA (288bp) protein (96aa)
Putative signal-transducing histidine kinase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPR5_9EURY
HTR-like protein
Putative signal-transducing histidine kinase {ECO:0000313|EMBL:EFW93518.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Halad
sw_4_scaffold_305_10
unknown

Not on your lists

6516..6752
DNA (237bp) protein (79aa)

This feature has no annotations

sw_4_scaffold_305_11
unknown

Not on your lists

6920..7804
DNA (885bp) protein (295aa)

This feature has no annotations

sw_4_scaffold_305_12
unknown

Not on your lists

7801..8964
DNA (1164bp) protein (388aa)

This feature has no annotations

sw_4_scaffold_305_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9251..9976)
DNA (726bp) protein (242aa)
udp_2; uridine phosphorylase 2 (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000313|EMBL:CAI49681.1}; EC=2.4.2.3 {ECO:0000313|EMBL:CAI49681.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Uridine phosphorylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB5_NATPD
sw_4_scaffold_305_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10085..11593
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20205.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_305_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11947..12924)
DNA (978bp) protein (326aa)
AIR synthase related protein domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2H7_HALJB
AIR synthase-like protein domain-containing protein
AIR synthase related protein domain protein {ECO:0000313|EMBL:ADJ14934.1}; AIR synthase-like protein domain-containing protein {ECO:0000313|EMBL:ELY35050.1}; TaxID=795797 species="Archaea; Euryarchaeo
sw_4_scaffold_305_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13271..13594
DNA (324bp) protein (108aa)
hypothetical protein, partial n=1 Tax=Halococcus hamelinensis RepID=UPI00029A34A4
sw_4_scaffold_305_17
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13683..14123
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C599_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18385.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
N-acetyltransferase GCN5
sw_4_scaffold_305_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14197..15543)
DNA (1347bp) protein (449aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminot
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2E7_9EURY
sw_4_scaffold_305_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15908..16858)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVH0_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ68854.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_4_scaffold_305_20
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16980..17936)
DNA (957bp) protein (319aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1227454 spe
5'-nucleotidase SurE n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M1F7_9EURY
Survival protein SurE
sw_4_scaffold_305_21
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17943..19022)
DNA (1080bp) protein (360aa)
MaoC domain-containing protein dehydratase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C493_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELZ17995.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrige
MaoC domain-containing protein dehydratase
sw_4_scaffold_305_22
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19104..20756
DNA (1653bp) protein (551aa)
AMP-dependent synthetase and ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYG0_HALTV
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADB59861.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkm
sw_4_scaffold_305_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20986..21549)
DNA (564bp) protein (188aa)
Alkyl sulfatase-like hydrolase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NV83_HALBP
alkyl sulfatase-like hydrolase
Alkyl sulfatase-like hydrolase {ECO:0000313|EMBL:ADQ69072.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bori
sw_4_scaffold_305_24
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21635..21892)
DNA (258bp) protein (86aa)
Ribonucleotide reductase subunit beta n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VYE6_9EURY
Ribonucleotide reductase subunit beta {ECO:0000313|EMBL:ELY42204.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
hypothetical protein
sw_4_scaffold_305_25
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21893..22333)
DNA (441bp) protein (147aa)
Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z4Q2_9EURY
ribonucleotide reductase beta subunit-like protein
Ribonucleotide reductase beta subunit-like protein {ECO:0000313|EMBL:AFO57667.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinem
Displaying 26 items

View Taxonomy