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sw_4_scaffold_306

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_306_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..584)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M200_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38425.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_4_scaffold_306_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(704..1048)
DNA (345bp) protein (115aa)
Glutaredoxin-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYA2_9EURY
Glutaredoxin-like protein {ECO:0000313|EMBL:EMA38426.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
glutaredoxin-like protein
sw_4_scaffold_306_3
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1269..2267)
DNA (999bp) protein (333aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1227452 spec
crotonase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KNY5_9EURY
sw_4_scaffold_306_4
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2549..3502
DNA (954bp) protein (318aa)
Glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNF8_9EURY
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY63285.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="
glycine/betaine ABC transporter substrate-binding protein
sw_4_scaffold_306_5
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3507..4226
DNA (720bp) protein (240aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNA7_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ELY63284.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.
binding-protein-dependent transport systems inner membrane component
sw_4_scaffold_306_6
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4223..5245
DNA (1023bp) protein (341aa)
ABC transporter n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XRM2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY63283.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
ABC transporter
sw_4_scaffold_306_7
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5247..5921
DNA (675bp) protein (225aa)
binding-protein-dependent transport systems inner membrane component; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein id=24626985 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:ERG98690.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
binding-protein-dependent transport systems inner membrane component
sw_4_scaffold_306_8
unknown

Not on your lists

comp(6065..6184)
DNA (120bp) protein (40aa)

This feature has no annotations

sw_4_scaffold_306_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6333..7946)
DNA (1614bp) protein (538aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNX8_9EURY
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
sw_4_scaffold_306_10
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8099..9667)
DNA (1569bp) protein (523aa)
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2)
Menaquinone-specific isochorismate synthase n=2 Tax=Haloarcula RepID=M0JS89_9EURY
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:EMA13585.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
sw_4_scaffold_306_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9713..10081
DNA (369bp) protein (123aa)
Surface glycoprotein n=1 Tax=Halogranum salarium B-1 RepID=J3JI03_9EURY
csg2; surface glycoprotein
Surface glycoprotein {ECO:0000313|EMBL:EJN61449.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_4_scaffold_306_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10168..10446
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VSF2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00140.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_4_scaffold_306_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10563..12110)
DNA (1548bp) protein (516aa)
NADH dehydrogenase subunit n (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain N n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCZ7_HALMO
Proton-translocating NADH-quinone oxidoreductase, chain N {ECO:0000313|EMBL:EMA50394.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
sw_4_scaffold_306_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12110..13705)
DNA (1596bp) protein (532aa)
Proton-translocating NADH-quinone oxidoreductase subunit M n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M960_HALMO
Proton-translocating NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:EMA42281.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
nuoM; NADH dehydrogenase-like complex, subunit M
sw_4_scaffold_306_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13702..15744)
DNA (2043bp) protein (681aa)
NADH dehydrogenase subunit l (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase subunit L n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXC6_9EURY
Proton-translocating NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:EMA50392.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
sw_4_scaffold_306_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15741..16043)
DNA (303bp) protein (101aa)
NADH dehydrogenase, subunit K (Ubiquinone) n=2 Tax=Haloarcula hispanica RepID=G0HVK8_HALHT
NADH-quinone oxidoreductase subunit K
NADH-quinone oxidoreductase subunit K {ECO:0000313|EMBL:AJF24691.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp
sw_4_scaffold_306_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16044..16502)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N128_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50390.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_306_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16502..16786)
DNA (285bp) protein (95aa)
NADH dehydrogenase subunit J {ECO:0000313|EMBL:EMA50894.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EMA50894.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
NADH dehydrogenase subunit J n=2 Tax=Halococcus RepID=M0N1B2_9EURY
NADH dehydrogenase subunit J
sw_4_scaffold_306_19
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16914..17171
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CL85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24025.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_4_scaffold_306_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17391..19112
DNA (1722bp) protein (574aa)
Inositol monophosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBQ5_9EURY
Inositol monophosphatase {ECO:0000313|EMBL:EMA43181.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
inositol monophosphatase
sw_4_scaffold_306_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19506..19982)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6U2_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15895.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
Displaying 21 items

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