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sw_4_scaffold_309

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_309_trna_1
unknown

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comp(148..218)
DNA (71bp)
transferRNA
sw_4_scaffold_309_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(302..952)
DNA (651bp) protein (217aa)
Methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3P7_HALMO
Methyltransferase {ECO:0000313|EMBL:EMA40437.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
methyltransferase type 11
sw_4_scaffold_309_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1088..3211)
DNA (2124bp) protein (708aa)
Type II secretion system protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIG7_9EURY
type II secretion system, protein F
Type II secretion system protein {ECO:0000313|EMBL:ERJ07059.1}; Type II secretion system, protein F {ECO:0000313|EMBL:CCQ34825.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_4_scaffold_309_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3473..5566)
DNA (2094bp) protein (698aa)
Type II secretion system protein E n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBQ2_HALXS
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AEH38320.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (s
sw_4_scaffold_309_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5830..6300
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49214.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_309_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6464..7027)
DNA (564bp) protein (188aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N725_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA53666.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
sw_4_scaffold_309_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7187..8905
DNA (1719bp) protein (573aa)
Phosphomannomutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV54_9EURY
Phosphomannomutase {ECO:0000313|EMBL:EMA49213.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
sw_4_scaffold_309_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9226..9657
DNA (432bp) protein (144aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGF4_9EURY
Cytidine deaminase {ECO:0000313|EMBL:ELZ34561.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
sw_4_scaffold_309_8
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9654..10532
DNA (879bp) protein (293aa)
udp1; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0IEB6_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ93794.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;
sw_4_scaffold_309_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10721..11875)
DNA (1155bp) protein (385aa)
NADH dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY21_9EURY
NADH dehydrogenase {ECO:0000313|EMBL:EMA49320.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
NADH dehydrogenase, FAD-containing subunit
sw_4_scaffold_309_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12229..12753)
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4Y0_HALJB
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:ELY36325.1}; Uncharacterized protein {ECO:0000313|EMBL:ADJ15597.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
sw_4_scaffold_309_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12907..13821
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halobacterium sp. DL1 RepID=G4IF06_9EURY
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHG03653.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacter
NAD-dependent epimerase/dehydratase
sw_4_scaffold_309_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13947..14903
DNA (957bp) protein (319aa)
Arginase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL9_9EURY
Arginase {ECO:0000313|EMBL:EMA55653.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
arginase
sw_4_scaffold_309_13
unknown

Not on your lists

comp(15015..15212)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 14 items

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