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sw_4_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_35_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

264..632
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MEN1_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42870.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
putative transcriptional regulator
sw_4_scaffold_35_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

629..964
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDV5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42869.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
growth inhibitor
sw_4_scaffold_35_3
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1069..1332
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B5V6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ06195.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_4_scaffold_35_4
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1329..1742
DNA (414bp) protein (138aa)
Nucleotide-binding protein, PIN domain-containing protein n=3 Tax=Haloferax RepID=L5NJ55_9EURY
Nucleotide-binding protein, PIN domain-containing protein {ECO:0000313|EMBL:ELZ93374.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source
DNA-binding protein
sw_4_scaffold_35_5
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1956..2447
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ED00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44913.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_4_scaffold_35_6
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2449..2880
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LW50_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58440.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_4_scaffold_35_7
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3235..3486
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:ADD05878.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_4_scaffold_35_8
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3487..3846
DNA (360bp) protein (120aa)
MazF family transcriptional regulator n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NPM8_9EURY
MazF family transcriptional regulator {ECO:0000313|EMBL:EMA59134.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipoly
transcriptional modulator of MazE/toxin MazF
sw_4_scaffold_35_9
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4055..4924)
DNA (870bp) protein (290aa)
sucD; succinate--CoA ligase, alpha subunit (ADP-forming) (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7E4_HALMT
sw_4_scaffold_35_10
unknown

Not on your lists

comp(4921..5163)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_4_scaffold_35_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5160..6305)
DNA (1146bp) protein (382aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUP9_9EURY
sw_4_scaffold_35_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6576..7796
DNA (1221bp) protein (407aa)
Glycosyl/glycerophosphate transferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1P7_9EURY
Glycosyl/glycerophosphate transferase {ECO:0000313|EMBL:EMA39757.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
glycosyl/glycerophosphate transferase
sw_4_scaffold_35_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7984..9492
DNA (1509bp) protein (503aa)
HAD-superfamily hydrolase, subfamily IIA (EC:3.1.3.41)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Halococcus hamelinensis RepID=UPI00029A772C
HAD-superfamily hydrolase, subfamily IIA {ECO:0000313|EMBL:EMA39756.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_4_scaffold_35_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9575..10528)
DNA (954bp) protein (318aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5U8_9EURY
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EMA39755.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
glycerophosphoryl diester phosphodiesterase
sw_4_scaffold_35_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10977..11951
DNA (975bp) protein (325aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZE7_9EURY
NADPH:quinone reductase {ECO:0000313|EMBL:EMA50678.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_35_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12049..12678)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4D3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60313.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
uracil DNA glycosylase
sw_4_scaffold_35_17
unknown

Not on your lists

comp(12810..13232)
DNA (423bp) protein (141aa)

This feature has no annotations

sw_4_scaffold_35_18
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13279..13554
DNA (276bp) protein (92aa)
Acylphosphatase {ECO:0000313|EMBL:ELZ02564.1}; EC=3.6.1.7 {ECO:0000313|EMBL:ELZ02564.1};; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="N
Acylphosphatase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AYT1_NATA1
acylphosphatase
sw_4_scaffold_35_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13663..15108
DNA (1446bp) protein (482aa)
Carbohydrate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF9_9EURY
Carbohydrate kinase {ECO:0000313|EMBL:EMA44462.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
carbohydrate kinase
sw_4_scaffold_35_20
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15105..15764
DNA (660bp) protein (220aa)
Probable cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SYJ3_NATMM
molybdenum cofactor biosynthesis protein C
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=547559 spec
sw_4_scaffold_35_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16183..18138
DNA (1956bp) protein (652aa)
molecular chaperone DnaK (EC:3.6.1.3)
Chaperone protein DnaK n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVN1_9EURY
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
sw_4_scaffold_35_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18178..19425
DNA (1248bp) protein (416aa)
Chaperone protein DnaJ n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4D4_9EURY
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
molecular chaperone DnaJ
sw_4_scaffold_35_23
unknown

Not on your lists

comp(19419..19742)
DNA (324bp) protein (108aa)

This feature has no annotations

sw_4_scaffold_35_24
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19768..20481
DNA (714bp) protein (238aa)
Phosphate permease n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3L0_9EURY
Phosphate permease {ECO:0000313|EMBL:EMA14714.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800
phosphate transporter
sw_4_scaffold_35_25
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20613..20975
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTT6_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10925.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_4_scaffold_35_26
unknown

Not on your lists

comp(20932..21156)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_4_scaffold_35_27

Not on your lists

comp(21300..21680)
DNA (381bp) protein (127aa)
Molecular chaperone, small heat shock protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0T5_9ARCH
Molecular chaperone, small heat shock protein {ECO:0000313|EMBL:ESS06181.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
molecular chaperone
sw_4_scaffold_35_28
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22059..22823
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTE5_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ65890.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_4_scaffold_35_29
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22958..23404
DNA (447bp) protein (149aa)
UspA domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZT4_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:ELZ28725.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pal
uspA17; UspA domain-containing protein
sw_4_scaffold_35_30
unknown

Not on your lists

comp(23441..23896)
DNA (456bp) protein (152aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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