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sw_4_scaffold_427

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_427_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

335..2299
DNA (1965bp) protein (655aa)
ATP-dependent RNA helicase protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DIB2_9EURY
ATP-dependent RNA helicase protein {ECO:0000313|EMBL:ERJ05687.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tia
SNF2 family helicase
sw_4_scaffold_427_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2296..5136
DNA (2841bp) protein (947aa)
Restriction endonuclease protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CW05_9EURY
Restriction endonuclease protein {ECO:0000313|EMBL:ERJ05686.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ34902.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
hypothetical protein
sw_4_scaffold_427_3
unknown

Not on your lists

5136..6077
DNA (942bp) protein (314aa)

This feature has no annotations

sw_4_scaffold_427_4
unknown

Not on your lists

6260..6415
DNA (156bp) protein (52aa)

This feature has no annotations

sw_4_scaffold_427_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6644..7288
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49333.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_427_6
unknown

Not on your lists

comp(7411..7890)
DNA (480bp) protein (160aa)

This feature has no annotations

sw_4_scaffold_427_7
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8056..8802)
DNA (747bp) protein (249aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNT6_NATP1
nucleoside-diphosphate-sugar epimerase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY71865.1}; Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGB33200.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota
sw_4_scaffold_427_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8931..9542)
DNA (612bp) protein (204aa)
Translation initiation factor IF-2 subunit beta n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7B9_9EURY
Translation initiation factor IF-2 subunit beta {ECO:0000313|EMBL:EMA53842.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor IF2/IF5
sw_4_scaffold_427_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9645..9977
DNA (333bp) protein (111aa)
Dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; Short=DHNA {ECO:0000256|HAMAP-Rule:MF_02130};; EC=4.1.2.25 {ECO:0000256|HAMAP-Rule:MF_02130};; 7,8-dihydroneopterin aldolase {ECO:0000256|H
Dihydroneopterin aldolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTW6_9EURY
hypothetical protein
sw_4_scaffold_427_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10072..10326)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NPH1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA59857.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_4_scaffold_427_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10489..10836)
DNA (348bp) protein (116aa)
Ferredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHE4_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA44768.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
fdx; ferredoxin
sw_4_scaffold_427_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10914..12317)
DNA (1404bp) protein (468aa)
Selenium-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5S0_9EURY
Selenium-binding protein {ECO:0000313|EMBL:EMA53277.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
56kDa selenium binding protein (SBP56)
sw_4_scaffold_427_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12706..13176
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W766_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00783.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_4_scaffold_427_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13441..14178)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49817.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
PAC2 family protein
sw_4_scaffold_427_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14410..15318
DNA (909bp) protein (303aa)
RNA methylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD55_9EURY
RNA methylase {ECO:0000313|EMBL:EMA49816.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
NOL1/NOP2/sun family putative RNA methylase
sw_4_scaffold_427_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15315..15881
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQR8_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10527.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_4_scaffold_427_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16012..17595)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49811.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_427_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17714..18163
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L3H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA28137.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_4_scaffold_427_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18214..19659)
DNA (1446bp) protein (482aa)
DNA repair protein Rad25 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD51_9EURY
DNA repair protein Rad25 {ECO:0000313|EMBL:EMA43278.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
helicase
sw_4_scaffold_427_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20283..20588
DNA (306bp) protein (102aa)
Protein GrpE n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBX5_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
molecular chaperone GrpE (heat shock protein)
sw_4_scaffold_427_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20593..20955
DNA (363bp) protein (121aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N212_9EURY
sw_4_scaffold_427_22
unknown

Not on your lists

comp(21088..21282)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_4_scaffold_427_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21838..22542)
DNA (705bp) protein (235aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ78_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
sw_4_scaffold_427_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23641..23796
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M258_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39786.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_4_scaffold_427_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23800..24768
DNA (969bp) protein (323aa)
Transcription initiation factor IIB n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCZ3_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
sw_4_scaffold_427_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24765..25586
DNA (822bp) protein (274aa)
DNA binding domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7H4_HALJB
DNA binding domain-containing protein
DNA binding domain-containing protein {ECO:0000313|EMBL:ADJ14069.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
sw_4_scaffold_427_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25717..25923
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49961.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_427_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26262..28190
DNA (1929bp) protein (643aa)
Chaperone protein DnaK n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAE3_9EURY
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
molecular chaperone DnaK
sw_4_scaffold_427_29
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28489..29289)
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VWF6_9EURY
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ELY41494.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
enoyl-CoA hydratase/carnithine racemase
sw_4_scaffold_427_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29446..31311)
DNA (1866bp) protein (622aa)
Ferredoxin domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC00_9EURY
Ferredoxin domain-containing protein {ECO:0000313|EMBL:EMA43271.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
ferredoxin domain-containing protein
Displaying items 1-30 of 36 in total

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