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sw_4_scaffold_446

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_446_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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336..656
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
rpoM; DNA-directed RNA-polymerase subunit M (EC:2.7.7.6)
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5B6_9EURY
sw_4_scaffold_446_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(804..1841)
DNA (1038bp) protein (346aa)
Sugar ABC transporter integral membrane subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF3_9EURY
Sugar ABC transporter integral membrane subunit {ECO:0000313|EMBL:ELZ27546.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
hypothetical protein
sw_4_scaffold_446_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1868..3052)
DNA (1185bp) protein (395aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWI2_9EURY
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ELZ27545.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
ribose ABC transporter, ribose-binding protein
sw_4_scaffold_446_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3245..4081)
DNA (837bp) protein (279aa)
ABC-transport system ATP binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D096_9EURY
ABC-transport system ATP binding protein {ECO:0000313|EMBL:ELZ27544.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
hypothetical protein
sw_4_scaffold_446_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4265..5065)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDC5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57366.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
fbaB; fructose-1,6-bisphosphate aldolase of the DhnA family
sw_4_scaffold_446_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5244..6389)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KIZ9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26621.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_446_7

Not on your lists

comp(6532..7509)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U4C4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05019.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_446_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7751..8176)
DNA (426bp) protein (142aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Halomicrobium katesii RepID=UPI0003734EAF
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA01120.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
carbohydrate ABC transporter ATP-binding protein, cut1 family
sw_4_scaffold_446_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8352..8822)
DNA (471bp) protein (157aa)
ABC transporter n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C230_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ16718.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
ABC transporter
sw_4_scaffold_446_10
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8840..11533
DNA (2694bp) protein (898aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HF05_9EURY
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:ELZ82327.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC
sw_4_scaffold_446_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11689..12246
DNA (558bp) protein (186aa)
hypothetical protein; K06940 id=24646468 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10643.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
Uncharacterized protein family (UPF0153)
sw_4_scaffold_446_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12351..13787)
DNA (1437bp) protein (479aa)
cyc; unspecific monooxygenase (cytochrome P450) (EC:1.14.14.1)
Cytochrome P450 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR83_NATPD
Cytochrome P450 {ECO:0000313|EMBL:CAI49361.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATC
sw_4_scaffold_446_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13922..14398)
DNA (477bp) protein (159aa)
Bacterioferritin comigrating protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M181_9EURY
Bacterioferritin comigrating protein {ECO:0000313|EMBL:EMA39552.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ham
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
sw_4_scaffold_446_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14501..15358)
DNA (858bp) protein (286aa)
Zinc transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF54_9EURY
Zinc transporter {ECO:0000313|EMBL:EMA43973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
zip; zinc transporter
sw_4_scaffold_446_15
unknown

Not on your lists

15668..15928
DNA (261bp) protein (87aa)

This feature has no annotations

sw_4_scaffold_446_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16036..16722)
DNA (687bp) protein (229aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUC6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA36773.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
sw_4_scaffold_446_17
unknown

Not on your lists

comp(16926..17192)
DNA (267bp) protein (89aa)

This feature has no annotations

sw_4_scaffold_446_18
unknown

Not on your lists

17901..18035
DNA (135bp) protein (45aa)

This feature has no annotations

sw_4_scaffold_446_19
unknown

Not on your lists

18032..18250
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 19 items

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