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sw_4_scaffold_61

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_61_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..402
DNA (402bp) protein (134aa)
Transposase (ISH16) n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M9H7_HALMO
Transposase (ISH16) {ECO:0000313|EMBL:EMA41294.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
transposase
sw_4_scaffold_61_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

537..818
DNA (282bp) protein (94aa)
Transposase IS4 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZU5_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA51262.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
transposase family protein
sw_4_scaffold_61_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(952..1791)
DNA (840bp) protein (280aa)
Proline dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYL7_9EURY
Proline dehydrogenase {ECO:0000313|EMBL:ELZ27738.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
proline dehydrogenase
sw_4_scaffold_61_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1910..3076)
DNA (1167bp) protein (389aa)
glycine/D-amino acid oxidase, deaminating (EC:1.4.3.19)
FAD dependent oxidoreductase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PH11_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EMA68879.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM
sw_4_scaffold_61_5
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3073..4686)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I216_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ90048.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
sw_4_scaffold_61_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5113..5946
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5A4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52309.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_61_7

Not on your lists

6083..6307
DNA (225bp) protein (75aa)
Cold-shock DNA-binding domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MK81_9ARCH
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEN05503.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_61_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6466..7014)
DNA (549bp) protein (183aa)
N-acetyltransferase GCN5 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XEB0_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELY59786.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DS
N-acetyltransferase GCN5
sw_4_scaffold_61_9
unknown

Not on your lists

comp(7360..7719)
DNA (360bp) protein (120aa)

This feature has no annotations

sw_4_scaffold_61_10
unknown

Not on your lists

comp(7723..7986)
DNA (264bp) protein (88aa)

This feature has no annotations

sw_4_scaffold_61_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8233..9918)
DNA (1686bp) protein (562aa)
Glucose-methanol-choline family oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5Z9_9EURY
Glucose-methanol-choline family oxidoreductase {ECO:0000313|EMBL:EMA53306.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
glucose-methanol-choline oxidoreductase
sw_4_scaffold_61_12
unknown

Not on your lists

10059..10682
DNA (624bp) protein (208aa)

This feature has no annotations

sw_4_scaffold_61_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10714..11061
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9B6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54466.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_61_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11217..11924
DNA (708bp) protein (236aa)
UPF0173 metal-dependent hydrolase C451_14410 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N452_9EURY
UPF0173 metal-dependent hydrolase C451_14410 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
hydrolase
sw_4_scaffold_61_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12145..12612
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3F004_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61287.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_4_scaffold_61_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12723..12911)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR14_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10090.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_4_scaffold_61_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13008..14006)
DNA (999bp) protein (333aa)
isocitrate dehydrogenase (NAD(+)) (EC:1.1.1.41)
Isocitrate dehydrogenase (NAD(+)) {ECO:0000313|EMBL:ACV48765.1}; EC=1.1.1.41 {ECO:0000313|EMBL:ACV48765.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Isocitrate dehydrogenase (NAD(+)) n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZJ7_HALMD
sw_4_scaffold_61_18
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14008..14775)
DNA (768bp) protein (256aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase, small subunit {ECO:0000313|EMBL:AGB38481.1}; EC=4.2.1.33 {ECO:0000313|EMBL:AGB38481.1};; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
3-isopropylmalate dehydratase, small subunit n=1 Tax=Natronococcus occultus SP4 RepID=L0K0F1_9EURY
sw_4_scaffold_61_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14772..16193)
DNA (1422bp) protein (474aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate is
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWV0_9EURY
sw_4_scaffold_61_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16190..16525)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5Y6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52509.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_61_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16522..17619)
DNA (1098bp) protein (366aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX10_9EURY
sw_4_scaffold_61_22
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17612..18349)
DNA (738bp) protein (246aa)
Acetolactate synthase small subunit n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M989_HALMO
Acetolactate synthase small subunit {ECO:0000313|EMBL:EMA42357.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrh
acetolactate synthase, small subunit
sw_4_scaffold_61_23

Not on your lists

comp(18346..20298)
DNA (1953bp) protein (651aa)
acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Acetolactate synthase n=1 Tax=halophilic archaeon DL31 RepID=G2MKR2_9ARCH
sw_4_scaffold_61_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20784..21827)
DNA (1044bp) protein (348aa)
leuA2; 2-isopropylmalate synthase (EC:2.3.3.13)
LeuA1 protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHT3_9EURY
LeuA1 protein {ECO:0000313|EMBL:EJN61274.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_4_scaffold_61_25
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22554..22847
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=I7CSD7_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY82139.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_4_scaffold_61_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23010..23687
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3M7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52522.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_61_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23932..25779
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0L9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying 27 items

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