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sw_4_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_88_1
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

404..979
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YUX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY77929.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
sw_4_scaffold_88_trna_1
unknown

Not on your lists

comp(1244..1316)
DNA (73bp)
transferRNA
sw_4_scaffold_88_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1379..1738)
DNA (360bp) protein (120aa)
Zinc finger CHY domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQE0_9EURY
Zinc finger CHY domain protein {ECO:0000313|EMBL:EMA46959.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
sw_4_scaffold_88_3
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1738..2349)
DNA (612bp) protein (204aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=2 Tax=Haloarcula RepID=TRMY_HALMA
hypothetical protein
sw_4_scaffold_88_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2432..3409)
DNA (978bp) protein (326aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRS8_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA36181.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
galE7; UDP-glucose 4-epimerase
sw_4_scaffold_88_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3435..4415)
DNA (981bp) protein (327aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA1_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA55513.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
galE5; UDP-glucose 4-epimerase
sw_4_scaffold_88_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4450..5613)
DNA (1164bp) protein (388aa)
UDP-sulfoquinovose synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR82_9EURY
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:EMA46965.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
sqdB; UDP-sulfoquinovose synthase
sw_4_scaffold_88_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5836..7653)
DNA (1818bp) protein (606aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2W6_9EURY
glucosamine/fructose-6-phosphate aminotransferase
sw_4_scaffold_88_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7653..8846)
DNA (1194bp) protein (398aa)
Nucleotidyl transferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MS82_HALMO
Nucleotidyl transferase {ECO:0000313|EMBL:EMA48471.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
nucleotidyl transferase
sw_4_scaffold_88_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9186..9815)
DNA (630bp) protein (210aa)
Heat shock protein DnaJ domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIJ7_9EURY
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:EMA45512.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
heat shock protein DnaJ domain-containing protein
sw_4_scaffold_88_10
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10010..10534
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XGC5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59733.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_4_scaffold_88_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10531..10902
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43327.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_88_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11105..12703
DNA (1599bp) protein (533aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWK5_HALBP
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:ADQ69425.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source
sw_4_scaffold_88_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12814..14616)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N228_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38908.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_88_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14642..15223)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45794.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_88_15
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15370..16185)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CQ55_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ24768.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_4_scaffold_88_16
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16362..18512)
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16498.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_4_scaffold_88_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18701..19948
DNA (1248bp) protein (416aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DLE6_9EURY
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:ELZ34974.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
sw_4_scaffold_88_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20015..20908
DNA (894bp) protein (298aa)
Bifunctional protein FolD n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N493_9EURY
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailanden
Methenyltetrahydrofolate cyclohydrolase
sw_4_scaffold_88_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20905..21426
DNA (522bp) protein (174aa)
ADP-ribose pyrophosphatase, GDP-mannose mannosyl hydrolase (EC:3.6.1.13 3.6.1.-)
Mut/nudix family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZX7_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA50853.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_88_20
unknown

Not on your lists

21653..21883
DNA (231bp) protein (77aa)

This feature has no annotations

sw_4_scaffold_88_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23008..23154
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MAC0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42298.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_88_22
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23547..23750
DNA (204bp) protein (68aa)
Transcriptional regulator PadR family protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XK35_9EURY
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:ELY62134.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natro
putative transcriptional regulator
sw_4_scaffold_88_23
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24024..24281)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1NRW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH00306.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_4_scaffold_88_24
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24481..24963
DNA (483bp) protein (161aa)
Thioredoxin n=2 Tax=Haloarcula hispanica RepID=G0HZY3_HALHT
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AJF27602.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_88_25
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25123..25608
DNA (486bp) protein (162aa)
Universal stress protein UspA n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U2Y3_9EURY
Putative universal stress protein {ECO:0000313|EMBL:CQR50015.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;
UspA domain-containing protein
sw_4_scaffold_88_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25642..26187)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50443.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_88_27
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26260..26763
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1PD06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89976.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_4_scaffold_88_28
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26826..26999)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49606.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_4_scaffold_88_29
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27423..27995
DNA (573bp) protein (191aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=2 Tax=Halobacteriaceae RepID=L0JNS0_NATP1
DNA-binding ferritin-like protein (oxidative damage protectant)
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:AGB32247.1}; Ferritin Dps family protein {ECO:0000313|EMBL:ELY75025.1}; TaxID=797303 species="Archaea; Euryarchaeota;
Displaying items 1-30 of 49 in total

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