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sw_4_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_93_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..111
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:ESP89063.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
sw_4_scaffold_93_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(157..459)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44292.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_93_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

558..878
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44293.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_93_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

909..1313
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49431.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_93_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1430..1651
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44295.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_93_6
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1786..2085
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SL53_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ57360.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
sw_4_scaffold_93_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2111..3079
DNA (969bp) protein (323aa)
arsA2; arsenical pump-driving ATPase (EC:3.6.3.16)
Arsenical pump-driving ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX77_9EURY
Arsenical pump-driving ATPase {ECO:0000313|EMBL:EMA49434.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
sw_4_scaffold_93_8
unknown

Not on your lists

3083..3301
DNA (219bp) protein (73aa)

This feature has no annotations

sw_4_scaffold_93_9
unknown

Not on your lists

3577..3828
DNA (252bp) protein (84aa)

This feature has no annotations

sw_4_scaffold_93_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3936..5846
DNA (1911bp) protein (637aa)
Carbon starvation protein, membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D495_9EURY
Carbon starvation protein, membrane protein {ECO:0000313|EMBL:ELZ30270.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
carbon starvation protein CstA
sw_4_scaffold_93_11
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6061..6786)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7H4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66092.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_4_scaffold_93_12
unknown

Not on your lists

comp(6783..6911)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_4_scaffold_93_13
unknown

Not on your lists

7150..7608
DNA (459bp) protein (153aa)

This feature has no annotations

sw_4_scaffold_93_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7670..9145
DNA (1476bp) protein (492aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=795797 species="Archaea; Euryarc
Proline--tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7U6_HALJB
sw_4_scaffold_93_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9388..13950
DNA (4563bp) protein (1521aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase, large subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N788_9EURY
Glutamate synthase, large subunit {ECO:0000313|EMBL:EMA53423.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
sw_4_scaffold_93_16
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14098..15075
DNA (978bp) protein (326aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XZN3_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY66043.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeot
nucleoside-diphosphate-sugar epimerase
sw_4_scaffold_93_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15187..16245
DNA (1059bp) protein (353aa)
egsA; glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8K3_9EURY
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMA
sw_4_scaffold_93_18
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16493..17284
DNA (792bp) protein (264aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F3H5_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ54591.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochsteniu
alpha/beta hydrolase fold protein
sw_4_scaffold_93_19
unknown

Not on your lists

17434..17604
DNA (171bp) protein (57aa)

This feature has no annotations

sw_4_scaffold_93_20
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17618..19429)
DNA (1812bp) protein (604aa)
Peptidase S9 prolyl oligopeptidase active site domain-containing protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZU64_9EURY
Peptidase S9 prolyl oligopeptidase active site domain-containing protein {ECO:0000313|EMBL:ELY89107.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natria
peptidase S9 prolyl oligopeptidase active site domain-containing protein
sw_4_scaffold_93_21
Lactobacillus pentosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19649..21274
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGB2_9EURY
Cell surface SD repeat protein {ECO:0000313|EMBL:EIW14347.1}; Flags: Fragment;; TaxID=1136177 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactob
Collagen domain protein
sw_4_scaffold_93_22

Not on your lists

comp(21501..21707)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1B7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06396.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_4_scaffold_93_trna_1
unknown

Not on your lists

22063..22144
DNA (82bp)
transferRNA
sw_4_scaffold_93_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22365..22610
DNA (246bp) protein (82aa)
30S ribosomal protein S13 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSK5_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
archaeal ribosomal protein S13P
sw_4_scaffold_93_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22610..23137
DNA (528bp) protein (176aa)
30S ribosomal protein S4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP59_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps4p; 30S ribosomal protein S4P
sw_4_scaffold_93_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


23154..23540
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE7_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
rps11p; 30S ribosomal protein S11P
sw_4_scaffold_93_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23543..24313
DNA (771bp) protein (257aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
sw_4_scaffold_93_trna_2
unknown

Not on your lists

24461..24545
DNA (85bp)
transferRNA
sw_4_scaffold_93_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


24722..25072
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L18
sw_4_scaffold_93_28
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


25069..25512
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L322_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;
ribosomal protein L13, archaeal/eukaryotic
Displaying items 1-30 of 47 in total

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