ggKbase home page

sw_4_scaffold_634_17

Organism: SW_4_Halobacteriales_65_28

near complete RP 34 / 55 MC: 4 BSCG 29 / 51 MC: 1 ASCG 38 / 38 MC: 1
Location: comp(12762..13337)

Top 3 Functional Annotations

Value Algorithm Source
TATA-box-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J609_HALJB similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 184.0
  • Bit_score: 345
  • Evalue 3.10e-92
TATA-box binding family protein similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 184.0
  • Bit_score: 345
  • Evalue 8.70e-93
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 184.0
  • Bit_score: 345
  • Evalue 4.30e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halalkalicoccus jeotgali → Halalkalicoccus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 576
ATGAGCGAAACCGAAATCACGGACCCGAAGGAGACCATCAACATCGAGAACGTGGTCGCCTCGACCGGGATCGGTCAGGAACTCGACCTCCAGAGCGTGGCGATGGATCTCGAGGGGGCGGACTACGACCCCGAGCAGTTCCCCGGGCTCGTCTACCGCACCCAGGACCCGAAATCCGCGGCACTGATCTTCCGGTCGGGCAAGATCGTCTGCACGGGTGCAAAGTCCACTGCGGACGTCCACGAGAGCCTCAATATCGTCTTCGACAAACTGCGCGACTTGGAGATCCGCGTCGAAGAGGAACCCGAGATCATCGTCCAGAACATCGTCACGAGCGCCGATCTGGGTCGTAACCTCAATCTCAACGCGATCGCGATCGGCTTAGGGTTGGAGAACATCGAGTACGAACCCGAGCAGTTCCCCGGCCTAGTCTATCGCCTCGACGAACCGAAGGTCGTCGCGCTCCTGTTCGGTTCGGGCAAGCTCGTGATCACCGGCGGAAAGGAACCCGTCGACGCCGAGCACGCCGTCGACAAGATCGTCTCCCGCCTGGAAGAACTCGGCCTGCTCGAATAG
PROTEIN sequence
Length: 192
MSETEITDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTGAKSTADVHESLNIVFDKLRDLEIRVEEEPEIIVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPKVVALLFGSGKLVITGGKEPVDAEHAVDKIVSRLEELGLLE*