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sw_4_scaffold_1013

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1013_1
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..222)
DNA (222bp) protein (74aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
UPF0284 protein HFX_0577 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R242_HALMT
UPF0284 protein C440_16584 {ECO:0000256|HAMAP-Rule:MF_01086}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA
sw_4_scaffold_1013_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(330..1109)
DNA (780bp) protein (260aa)
Adenosylcobinamide amidohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N998_9EURY
Adenosylcobinamide amidohydrolase {ECO:0000313|EMBL:EMA53230.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
hypothetical protein
sw_4_scaffold_1013_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1102..2220)
DNA (1119bp) protein (373aa)
cobD1; L-threonine-O-3-phosphate decarboxylase (EC:4.1.1.81)
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6X6_9EURY
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:ELZ30568.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
sw_4_scaffold_1013_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2269..2640)
DNA (372bp) protein (124aa)
ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (EC:2.7.7.60)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D513_9EURY
4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000313|EMBL:ELZ30571.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
sw_4_scaffold_1013_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2735..4444)
DNA (1710bp) protein (570aa)
Probable cobalamin biosynthesis protein CobD n=2 Tax=Haloarcula RepID=M0K3W2_9EURY
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
cobalamin biosynthesis protein CobD
sw_4_scaffold_1013_6
unknown

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5401..5577
DNA (177bp) protein (59aa)

This feature has no annotations

sw_4_scaffold_1013_trna_1
unknown

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comp(5714..5787)
DNA (74bp)
transferRNA
sw_4_scaffold_1013_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5860..6531
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7E6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_1013_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6630..6974
DNA (345bp) protein (115aa)
CopG family transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D702_9EURY
CopG family transcriptional regulator {ECO:0000313|EMBL:ELZ30598.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
CopG family transcriptional regulator
sw_4_scaffold_1013_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6977..8191
DNA (1215bp) protein (405aa)
Cell division protein FtsZ n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D8X7_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
cell division protein FtsZ
sw_4_scaffold_1013_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8276..9268)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D572_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30600.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
PP-loop domain-containing protein
sw_4_scaffold_1013_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9417..10067
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N2F2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA51314.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_1013_12
unknown

Not on your lists

10147..10299
DNA (153bp) protein (51aa)

This feature has no annotations

sw_4_scaffold_1013_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10300..11253)
DNA (954bp) protein (318aa)
Type 11 methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D685_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELZ30202.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
type 11 methyltransferase
Displaying 14 items

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