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sw_4_scaffold_1218_11

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: 5812..6006

Top 3 Functional Annotations

Value Algorithm Source
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 66.0
  • Bit_score: 130
  • Evalue 1.50e-28
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 66.0
  • Bit_score: 130
  • Evalue 7.30e-28
DNA-directed RNA polymerase subunit N n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 66.0
  • Bit_score: 130
  • Evalue 5.30e-28

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Taxonomy

Haloarcula sinaiiensis → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 195
ATGATGGTCCCGGTCCGGTGTTTCACCTGTGGCAACGTGGTCGGCGAGCACTGGGAGGAGTTCAGGGCTCGCACCCGCGAGGGCGAGGAGGACCCCGAGCAGGTGCTGGACGAACTCGGCGTCGAGCGCCACTGCTGTCGCCGGATGCTCGTCTCGCACAAGGACCTGGTCGACATCGTCGCACCCTATCAATGA
PROTEIN sequence
Length: 65
MMVPVRCFTCGNVVGEHWEEFRARTREGEEDPEQVLDELGVERHCCRRMLVSHKDLVDIVAPYQ*