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sw_4_scaffold_1218

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1218_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..403
DNA (402bp) protein (134aa)
Probable cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Ru
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT51_9EURY
molybdenum cofactor biosynthesis protein A
sw_4_scaffold_1218_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(955..1242)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25575.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_1218_3
unknown

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comp(1313..1759)
DNA (447bp) protein (149aa)

This feature has no annotations

sw_4_scaffold_1218_trna_1
unknown

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1999..2083
DNA (85bp)
transferRNA
sw_4_scaffold_1218_4
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2099..2629
DNA (531bp) protein (177aa)
30S ribosomal protein S13 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVH9_HALAR
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis
sw_4_scaffold_1218_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2629..3150
DNA (522bp) protein (174aa)
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps4p; 30S ribosomal protein S4P
sw_4_scaffold_1218_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3147..3536
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11
sw_4_scaffold_1218_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3539..4354
DNA (816bp) protein (272aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUM9_9EURY
RNA polymerase insert
sw_4_scaffold_1218_trna_2
unknown

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4550..4634
DNA (85bp)
transferRNA
sw_4_scaffold_1218_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4644..4994
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
50S ribosomal protein L18e
sw_4_scaffold_1218_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4991..5476
DNA (486bp) protein (162aa)
50S ribosomal protein L13 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J218_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
50S ribosomal protein L13Ae (L13p)
sw_4_scaffold_1218_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5700..5804
DNA (105bp) protein (35aa)
30S ribosomal protein S9 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRS8_9EURY
rps9p; 30S ribosomal protein S9
30S ribosomal protein S9; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 700922 / JCM 11081
sw_4_scaffold_1218_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5812..6006
DNA (195bp) protein (65aa)
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit N n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH4_9EURY
sw_4_scaffold_1218_12
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6003..6179
DNA (177bp) protein (59aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
DNA-directed RNA polymerase subunit K n=10 Tax=Haloferax RepID=D4GWX4_HALVD
sw_4_scaffold_1218_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6208..7413
DNA (1206bp) protein (402aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR5_9EURY
enolase
sw_4_scaffold_1218_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7410..8195
DNA (786bp) protein (262aa)
30S ribosomal protein S2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT8_9EURY
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
30S ribosomal protein S2
Displaying 16 items

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