ggKbase home page

sw_4_scaffold_1218

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
sw_4_scaffold_1218_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..403
-----------------
DNA (402bp)
protein (134aa)
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT51_9EURY
molybdenum cofactor biosynthesis protein A
sw_4_scaffold_1218_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(955..1242)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQQ6_9EURY
hypothetical protein
sw_4_scaffold_1218_3
unknown

Not on your lists

comp(1313..1759)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

sw_4_scaffold_1218_trna_1
unknown

Not on your lists

1999..2083
-----------------
DNA (85bp)
transferRNA
sw_4_scaffold_1218_4
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2099..2629
-----------------
DNA (531bp)
protein (177aa)
BSCG--ribosomal--protein--S13
ASCG--Ribosomal--protein--S13
30S ribosomal protein S13 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVH9_HALAR
rps13p; 30S ribosomal protein S13
sw_4_scaffold_1218_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2629..3150
-----------------
DNA (522bp)
protein (174aa)
BSCG--ribosomal--protein--S4
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY
rps4p; 30S ribosomal protein S4P
sw_4_scaffold_1218_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3147..3536
-----------------
DNA (390bp)
protein (130aa)
BSCG--ribosomal--protein--S11
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
rps11p; 30S ribosomal protein S11
sw_4_scaffold_1218_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3539..4354
-----------------
DNA (816bp)
protein (272aa)
DNA-directed RNA polymerase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUM9_9EURY
RNA polymerase insert
sw_4_scaffold_1218_trna_2
unknown

Not on your lists

4550..4634
-----------------
DNA (85bp)
transferRNA
sw_4_scaffold_1218_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4644..4994
-----------------
DNA (351bp)
protein (117aa)
ASCG--Ribosomal--protein--L18e
50S ribosomal protein L18e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR0_9EURY
50S ribosomal protein L18e
sw_4_scaffold_1218_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4991..5476
-----------------
DNA (486bp)
protein (162aa)
ASCG--Ribosomal--protein--L13
50S ribosomal protein L13 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J218_9EURY
50S ribosomal protein L13Ae (L13p)
sw_4_scaffold_1218_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5700..5804
-----------------
DNA (105bp)
protein (35aa)
ASCG--Ribosomal--protein--S9
30S ribosomal protein S9 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRS8_9EURY
rps9p; 30S ribosomal protein S9
sw_4_scaffold_1218_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5812..6006
-----------------
DNA (195bp)
protein (65aa)
ASCG--DNA-directed--RNA--polymerase--subunit--N
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH4_9EURY
sw_4_scaffold_1218_12
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6003..6179
-----------------
DNA (177bp)
protein (59aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K n=10 Tax=Haloferax RepID=D4GWX4_HALVD
sw_4_scaffold_1218_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6208..7413
-----------------
DNA (1206bp)
protein (402aa)
Enolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR5_9EURY
enolase
sw_4_scaffold_1218_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7410..8195
-----------------
DNA (786bp)
protein (262aa)
BSCG--ribosomal--protein--S2
ASCG--Ribosomal--protein--S2
30S ribosomal protein S2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT8_9EURY
30S ribosomal protein S2
Displaying 16 items

View Taxonomy