ggKbase home page

sw_4_scaffold_1160

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1160_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..583
DNA (582bp) protein (194aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
tRNA-(4-demethylwyosine) synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB1_NATM8
taw1; tRNA-(4-demethylwyosine) synthase
sw_4_scaffold_1160_2
unknown

Not on your lists

comp(630..1355)
DNA (726bp) protein (242aa)

This feature has no annotations

sw_4_scaffold_1160_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1847..2557
DNA (711bp) protein (237aa)
ribK; CTP-dependent riboflavin kinase (EC:2.7.1.161)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
Riboflavin kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNQ1_NATM8
sw_4_scaffold_1160_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2541..3266
DNA (726bp) protein (242aa)
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:5.4.99.-)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=348780 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUQ2_NATPD
sw_4_scaffold_1160_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3988..4917
DNA (930bp) protein (310aa)
ilvE_1; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CAI50609.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CAI50609.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
Branched-chain amino acid aminotransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMP9_NATPD
sw_4_scaffold_1160_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4974..5315)
DNA (342bp) protein (114aa)
hypothetical protein id=24643806 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH13525.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_4_scaffold_1160_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5322..5603)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKY0_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36713.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_1160_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5708..6634
DNA (927bp) protein (309aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818, ECO:0000313|EMBL:ELZ21950.1}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {E
Ribonuclease Z n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CFB1_9EURY
hypothetical protein
sw_4_scaffold_1160_9
unknown

Not on your lists

6673..7692
DNA (1020bp) protein (340aa)

This feature has no annotations

sw_4_scaffold_1160_10
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7694..8770
DNA (1077bp) protein (359aa)
ABC-type transport system permease protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WPD9_9EURY
ABC-type transport system permease protein {ECO:0000313|EMBL:ELY51360.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubr
ABC-type multidrug transport system, permease component
sw_4_scaffold_1160_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8763..9458
DNA (696bp) protein (232aa)
ABC transporter n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WPG4_9EURY
ABC transporter {ECO:0000313|EMBL:ELY51359.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
ABC-type multidrug transport system, ATPase component
sw_4_scaffold_1160_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9455..9910)
DNA (456bp) protein (152aa)
MaoC family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1G7_NATM8
maoC3; MaoC family protein
MaoC domain protein {ECO:0000313|EMBL:CCQ36320.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_4_scaffold_1160_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10699..11286
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL44_NATM8
hypothetical protein
DUF460 domain protein {ECO:0000313|EMBL:CCQ37048.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
Displaying 13 items

View Taxonomy